CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.6962.1.S1_at

Gene name sorbitol dehydrogenase

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.6962.1.S1_at CA404020 sorbitol dehydrogenase - 2e-1 At5g51970 sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative S.X. H.G.
0.67 85.8 Zm.17628.1.S1_at CN845468 - - 6e-17 At2g34560 katanin, putative S.X. H.G.
0.61 79.5 Zm.6746.1.A1_at CK347370 hypothetical protein LOC100279874 - 2e-3 At3g63460 WD-40 repeat family protein S.X. H.G.
0.61 79.5 Zm.8865.1.A1_at BM267927 hypothetical protein LOC100191271 - 3e-9 At5g35460 unknown protein S.X. H.G.
0.55 71.6 Zm.17366.1.S1_s_at CK371241 - - 1e+1 At5g20060 phospholipase/carboxylesterase family protein S.X. H.G.
0.50 65.7 Zm.15542.1.S1_at CD219383 - - 2e-2 At4g29080 PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
19.1 99.2 GSM205420 Mo17 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
16.8 99.1 GSM205422 Mo17xB73 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
15.0 98.9 GSM205427 Mo17xB73 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
14.7 98.9 GSM205434 Mo17xB73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
14.0 98.8 GSM205431 Mo17 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
12.5 98.7 GSM205424 Mo17 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
12.0 98.6 GSM205436 B73xMo17 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
11.5 98.6 GSM205421 B73 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
11.2 98.5 GSM205423 B73xMo17 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
10.9 98.5 GSM205433 B73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e-3 42 Zm.1716.1.S1_at AW400197 RALF - 4e-1 At5g19875 unknown protein C.G. S.X.
0.02 9e-2 38 Zm.8806.1.A1_at BM075728 - - 2e+1 At5g35640 - C.G. S.X.
0.02 9e-2 38 Zm.7769.1.S1_at AY105367.1 protein YABBY - 2e-12 At4g00180 YAB3 (YABBY3) C.G. S.X.
0.01 9e-2 38 Zm.7598.1.A1_at CF629653 - - 3e-3 At2g40510 40S ribosomal protein S26 (RPS26A) C.G. S.X.
0.01 9e-2 38 Zm.6906.1.A1_at CD437056 - - 3e-25 At3g14410 transporter-related C.G. S.X.
0.01 9e-2 38 Zm.3360.1.S1_at AY107010.1 phosphoserine aminotransferase - 4e+0 At1g79170 unknown protein C.G. S.X.
0.01 9e-2 38 Zm.13137.1.S1_x_at AY106110.1 - - 6e+0 At5g20900 JAZ12 (JASMONATE-ZIM-DOMAIN PROTEIN 12) C.G. S.X.
0.01 9e-2 38 Zm.13137.1.A1_at AY106110.1 - - 6e+0 At5g20900 JAZ12 (JASMONATE-ZIM-DOMAIN PROTEIN 12) C.G. S.X.
0.01 9e-2 38 Zm.13137.1.S1_at AY106110.1 - - 6e+0 At5g20900 JAZ12 (JASMONATE-ZIM-DOMAIN PROTEIN 12) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 2e-1 38 Arabidopsis thaliana At5g51970 835272 sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro. - - - C.G. S.X.
0.02 5e-3 44 Glycine max PsAffx.CL959Contig1_at PsAffx.CL959Contig1 - - 2e+0 At5g61412 unknown protein C.G. S.X.
0.47 3e-122 438 Hordeum vulgare Contig4192_at Contig4192 - - 2e-4 At5g51970 sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative C.G. S.X.
0.57 0 1045 Oryza sativa Os08g0545200 AK101517.1 - NAD-dependent sorbitol dehydrogenase (EC 1.1.1.14) 1e-2 At5g51970 sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.205313.1.S1_at pmrna10528 hypothetical protein - 2e+0 At3g27831 - C.G. S.X.
0.47 6e-125 448 Triticum aestivum Ta.21428.1.S1_at BJ225819 - - 6e-5 At5g51970 sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative C.G. S.X.
0.03 4e-6 52 Vitis vinifera 1608527_at CF515950 hypothetical protein LOC100265888 - 1e-42 At5g51970 sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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