Gene omics information

Query gene ID Zm.6948.1.A1_at
Gene name serine/threonine-protein phosphatase PP1
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7792.1Zm.6948.1.A1_atAW288752serine/threonine-protein phosphatase PP1-8e-12At2g29400TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)S.X.H.G.
0.6785.8Zm.13457.1.A1_atAY109190.1ATP binding protein-1e-1At4g35230BSK1 (BR-SIGNALING KINASE 1)S.X.H.G.
0.6785.8Zm.11783.1.A1_atBM380733hypothetical protein LOC100191487-4e+0At5g42510disease resistance-responsive family proteinS.X.H.G.
0.6785.8Zm.2784.1.A1_atCF629950hypothetical protein LOC100276915-5e-8At5g17420IRX3 (IRREGULAR XYLEM 3)S.X.H.G.
0.5369.1Zm.3230.1.A1_atBM335873--5e-3At5g42510disease resistance-responsive family proteinS.X.H.G.
0.5065.7Zm.11378.1.A1_atCB351158hypothetical protein LOC100272914-6e-1At5g06610unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.597.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.497.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.297.4GSM320439protocol: mRNA - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.797.2GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydis
5.797.2GSM320438protocol: mRNA - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.497.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.296.9GSM253274ZM_8d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
4.896.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.696.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.296.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.364e-166583Zm.38.1.S1_atM60215.1ser/thr protein phosphatase1-1e-12At2g29400TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)C.G.S.X.
0.143e-25115Zm.4824.2.S1_atAY109296.1--1e-30At2g39840TOPP4C.G.S.X.
0.088e-1063Zm.2365.2.S1_atAI739988hypothetical protein LOC100216757-1e-14At1g64040TOPP3C.G.S.X.
0.088e-1063Zm.2365.2.S1_x_atAI739988hypothetical protein LOC100216757-1e-14At1g64040TOPP3C.G.S.X.
0.075e-857Zm.2365.1.A1_atAY105210.1hypothetical protein LOC100191199-3e-28At1g64040TOPP3C.G.S.X.
0.075e-857Zm.2365.1.A1_a_atAY105210.1hypothetical protein LOC100191199 /// hypothetical protein LOC100216757-3e-28At1g64040TOPP3C.G.S.X.
0.051e-550Zm.6274.1.A1_atAI691216--9e-16At5g27840TOPP8C.G.S.X.
0.061e-550Zm.17588.1.A1_atCA405217hypothetical protein LOC100272981-1e-4At5g59160TOPP2C.G.S.X.
0.025e-238Zm.5378.1.A1_atCA404486--1e-39At4g26720PPX1 (PROTEIN PHOSPHATASE X 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.208e-1271Arabidopsis thalianaAt2g29400817489TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)Type 1 protein phosphatase, expressed in roots, rosettes and flowers---C.G.S.X.
0.245e-26119Glycine maxGmaAffx.89525.1.S1_s_atCK606517--3e-26At2g39840TOPP4C.G.S.X.
0.408e-72270Hordeum vulgareContig1224_s_atContig1224--8e-11At4g11240TOPP7C.G.S.X.
0.305e-101369Oryza sativaOs02g0820000AF383877.1-Serine/threonine protein phosphatase PP1 isozyme 2(EC 3.1.3.16)3e-9At3g46820TOPP5C.G.S.X.
0.236e-35149Populus trichocarpaPtpAffx.1959.1.S1_atCK091020--4e-32At4g11240TOPP7C.G.S.X.
0.552e-135482Triticum aestivumTaAffx.58375.1.S1_atCA620121--4e-6At5g59160TOPP2C.G.S.X.
0.071e-756Vitis vinifera1615836_atBQ797478hypothetical protein LOC100258649-5e-9At5g59160TOPP2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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