Gene omics information

Query gene ID	Zm.6915.1.S1_at
Gene name	hypothetical protein LOC100280116
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.6915.1.S1_at	AW256266	hypothetical protein LOC100280116	-	5e-1	At5g64160	unknown protein	S.X.	H.G.	Please select
0.73	89.9	Zm.6103.3.S1_at	AI668289	-	-	8e-1	At1g21010	unknown protein	S.X.	H.G.	Please select
0.59	76.1	Zm.12244.1.A1_at	AY105130.1	-	-	4e-8	At2g37500	arginine biosynthesis protein ArgJ family	S.X.	H.G.	Please select
0.59	76.1	Zm.3743.2.S1_at	AY109746.1	-	-	2e+0	At5g04045	Expressed protein	S.X.	H.G.	Please select
0.50	65.7	Zm.3743.2.A1_a_at	CF624095	hypothetical protein LOC100274177	-	2e+0	At5g04045	Expressed protein	S.X.	H.G.	Please select
0.47	59.9	Zm.6916.1.S1_at	AW067358	hypothetical protein LOC100273981	-	9e-13	At5g66750	CHR1 (CHROMATIN REMODELING 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.1	94.3	GSM202310	B73 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.0	94.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.9	93.8	GSM202319	Mo17 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
2.7	93.2	GSM202318	B73xMo17 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
2.7	93.2	GSM202313	B73xMo17 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
2.7	93.2	GSM202315	B73 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
2.6	92.9	GSM202322	B73x Mo17 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
2.6	92.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.6	92.9	GSM202309	Mo17 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
2.5	92.6	GSM202320	B73 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	9e-4	44	Zm.5669.1.A1_at	AI629879	peroxisomal membrane carrier protein	-	1e-2	At2g39970	peroxisomal membrane protein (PMP36)	C.G.	S.X.	Please select
0.03	9e-4	44	Zm.3792.1.S1_at	CA826763	hypothetical protein LOC100276631	-	9e-2	At2g45450	ZPR1 (LITTLE ZIPPER 1)	C.G.	S.X.	Please select
0.02	5e-2	38	Zm.9756.1.A1_at	BM338065	-	-	5e+0	At5g38800	AtbZIP43 (Arabidopsis thaliana basic leucine-zipper 43)	C.G.	S.X.	Please select
0.01	5e-2	38	Zm.24.2.S1_a_at	AJ001635.1	viviparous1	-	3e+0	At2g40765	unknown protein	C.G.	S.X.	Please select
0.01	5e-2	38	Zm.24.2.A1_at	AJ001635.1	viviparous1	-	3e+0	At2g40765	unknown protein	C.G.	S.X.	Please select
0.01	5e-2	38	Zm.24.1.S1_at	M60214.1	viviparous1	-	3e-17	At3g24650	ABI3 (ABA INSENSITIVE 3)	C.G.	S.X.	Please select
0.01	5e-2	38	Zm.24.2.S1_at	AJ001635.1	viviparous1	-	3e+0	At2g40765	unknown protein	C.G.	S.X.	Please select
0.02	5e-2	38	Zm.10313.1.S1_at	AY082396.1	knotted1-interacting protein	-	2e-7	At2g16400	BLH7 (bell1-like homeodomain 7)	C.G.	S.X.	Please select
0.03	2e-1	36	ZmAffx.807.1.A1_at	AI770389	Hypothetical protein LOC100194367	-	3e+0	At1g65650	UCH2	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	5e-1	36	Arabidopsis thaliana	At5g64160	836537	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	7e-1	36	Glycine max	HgAffx.18835.1.S1_at	CA940345	-	-	4e+0	At1g49930	-	C.G.	S.X.	Please select
0.31	2e-35	149	Hordeum vulgare	Contig2808_at	Contig2808	-	-	2e+0	At5g52740	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.46	9e-32	139	Oryza sativa	Os02g0753200	AK067176.1	-	Conserved hypothetical protein	6e-10	At5g64160	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	7e-1	36	Populus trichocarpa	PtpAffx.454.12.S1_s_at	DN483658	hypothetical protein	-	1e+0	At2g22426	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.30	1e-35	151	Triticum aestivum	Ta.2849.1.S1_at	CK203000	-	-	5e-1	At5g52740	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.06	1e-1	36	Vitis vinifera	1614494_at	CB970251	hypothetical protein LOC100251961	-	6e-2	At5g64160	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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