Gene omics information

Query gene ID	Zm.6822.2.S1_a_at
Gene name	receptor expression-enhancing protein 3
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.6822.2.S1_a_at	CO518852	receptor expression-enhancing protein 3	-	3e-2	At5g42560	abscisic acid-responsive HVA22 family protein	S.X.	H.G.	Please select
0.73	89.9	Zm.13188.3.S1_x_at	BM076074	hypothetical protein LOC100193240	-	8e-6	At2g37270	ATRPS5B (RIBOSOMAL PROTEIN 5B)	S.X.	H.G.	Please select
0.73	89.9	Zm.5962.1.S1_at	AY241545.1	glyoxalase I	-	1e-17	At1g11840	ATGLX1 (GLYOXALASE I HOMOLOG)	S.X.	H.G.	Please select
0.73	89.9	Zm.3350.2.A1_at	CA400679	U6 snRNA-associated Sm-like protein LSm4	-	7e-34	At5g27720	emb1644 (embryo defective 1644)	S.X.	H.G.	Please select
0.67	85.8	Zm.1596.1.S1_at	AY104099.1	-	-	9e-1	At4g00880	auxin-responsive family protein	S.X.	H.G.	Please select
0.55	71.6	Zm.12898.1.A1_at	CA401243	hypothetical protein LOC100274425	-	8e+0	At3g25950	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.9	97.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.4	97.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.2	97.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9	97.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.1	97.4	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.6	97.1	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.4	97.0	GSM290555	CCR mutant M1 with array type maize from Affymetrix	GSE11531	Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1758	Zm.6822.2.A1_a_at	CO518852	-	-	3e-2	At5g42560	abscisic acid-responsive HVA22 family protein	C.G.	S.X.	Please select
1.00	0	1758	Zm.6822.2.A1_at	CO518852	-	-	3e-2	At5g42560	abscisic acid-responsive HVA22 family protein	C.G.	S.X.	Please select
0.51	0	767	Zm.6822.1.S1_at	CF009268	receptor expression-enhancing protein 3	-	4e-2	At5g42560	abscisic acid-responsive HVA22 family protein	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.8493.1.S1_at	BM074400	hypothetical protein LOC100272804	-	1e-1	At1g75700	HVA22G (HVA22-LIKE PROTEIN G)	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.2985.1.A1_at	AI861306	-	-	8e-1	At5g04850	VPS60.2	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.9646.1.A1_at	BM334563	negatively light-regulated protein	-	5e+0	At1g32700	zinc-binding family protein	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.8914.1.S1_at	BM073720	hypothetical protein LOC100275965	-	2e+0	At3g47810	MAG1 (MAIGO 1)	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.7864.1.A1_at	BM080210	-	-	7e+0	At5g05220	unknown protein	C.G.	S.X.	Please select
0.01	8e-1	34	Zm.6520.1.A1_at	AI833479	hypothetical protein LOC100276260	-	1e+0	At5g24580	copper-binding family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	3e-2	40	Arabidopsis thaliana	At5g42560	834262	abscisic acid-responsive HVA22 family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOBV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	1e-2	42	Glycine max	GmaAffx.44482.1.S1_at	BE475065	-	-	8e-20	At5g42560	abscisic acid-responsive HVA22 family protein	C.G.	S.X.	Please select
0.40	8e-103	373	Hordeum vulgare	Contig10397_at	Contig10397	-	-	1e-2	At5g42560	abscisic acid-responsive HVA22 family protein	C.G.	S.X.	Please select
0.38	1e-126	454	Oryza sativa	Os03g0250200	AK058393.1	-	Pathogenicity protein PATH531-like protein	1e-5	At1g75700	HVA22G (HVA22-LIKE PROTEIN G)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.12	4e-8	59	Populus trichocarpa	PtpAffx.249.221.S1_at	CK096917	hypothetical protein	-	7e-38	At5g42560	abscisic acid-responsive HVA22 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.50	8e-157	553	Triticum aestivum	TaAffx.30851.1.S1_at	CA621583	-	-	4e+0	At5g19050	unknown protein	C.G.	S.X.	Please select
0.09	9e-6	50	Vitis vinifera	1615467_at	CF511291	hypothetical protein LOC100245445	-	1e-13	At1g75700	HVA22G (HVA22-LIKE PROTEIN G)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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