Gene omics information

Query gene ID Zm.6790.1.A1_at
Gene name shugoshin-1
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5976.1Zm.6790.1.A1_atAI396367shugoshin-1-3e+0At2g05335SCRL15 (SCR-Like 15)S.X.H.G.
0.5065.7Zm.13034.1.S1_atAY106028.1--8e-7At2g12400unknown proteinS.X.H.G.
0.5065.7Zm.11837.1.A1_atBM381140hypothetical protein LOC100275424-1e+0At4g16380metal ion bindingS.X.H.G.
0.5065.7Zm.4160.1.A1_atCF243936indole-3-acetate beta-glucosyltransferase-1e-2At4g15550IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)S.X.H.G.
0.4658.4Zm.17630.1.A1_atCK348094--4e-1At1g06760histone H1, putativeS.X.H.G.
0.4048.5Zm.9097.1.A1_atBM266610--1e+0At2g17640ATSERAT3S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.198.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.398.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.698.6GSM202303Mo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
11.498.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.898.5GSM202297Mo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
10.398.4GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
10.398.4GSM202304B73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
10.298.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.698.3GSM202299Mo17xB73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
9.698.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+032Zm.8767.2.A1_a_atBM351177--6e+0At3g12510unknown proteinC.G.S.X.
0.021e+032Zm.4218.1.S1_atAI861340hypothetical protein LOC100275459-8e-1At2g03310unknown proteinC.G.S.X.
0.011e+032Zm.229.1.S1_atL33912.1aspartate kinase-homoserine dehydrogenase-2e-24At4g19710bifunctional aspartate kinase/homoserine dehydrogenase, putative / AK-HSDH, putativeC.G.S.X.
0.021e+032Zm.19021.1.A1_atCO531319virulence-related protein Nf314-9e-7At2g35780scpl26 (serine carboxypeptidase-like 26)C.G.S.X.
0.025e+030Zm.5669.1.A1_atAI629879peroxisomal membrane carrier protein-1e-2At2g39970peroxisomal membrane protein (PMP36)C.G.S.X.
0.015e+030Zm.5546.1.A1_atBM079097hypothetical protein LOC100192483-1e-14At3g27020YSL6 (YELLOW STRIPE LIKE 6)C.G.S.X.
0.015e+030Zm.526.1.S1_atAF242320.1hypothetical LOC541826-1e-3At5g14620DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2)C.G.S.X.
0.015e+030Zm.4508.1.A1_atCF013098hypothetical protein LOC100192829-2e-20At2g05990MOD1 (MOSAIC DEATH 1)C.G.S.X.
0.015e+030Zm.3978.1.A1_atBQ538157--3e-17At1g70320UPL2 (UBIQUITIN-PROTEIN LIGASE 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.063e+032Arabidopsis thalianaAt2g053353768061SCRL15 (SCR-Like 15)Encodes a member of a family of small, secreted, cysteine rich proteins with sequence similarity to SCR (S locus cysteine-rich protein).---C.G.S.X.
0.054e+032Glycine maxGmaAffx.60569.1.S1_atBQ611533--2e+0At1g15757-C.G.S.X.
0.041e+032Hordeum vulgareHVSMEa0015G15r2_s_atHVSMEa0015G15r2--8e-1At3g60090VQ motif-containing proteinC.G.S.X.
0.056e+032Oryza sativaOs01g0612800AK071035.1-Conserved hypothetical protein3e-1At1g79975-C.G.S.X.
0.052e-240Populus trichocarpaPtpAffx.57032.1.A1_atCV241773--5e+0At1g02320unknown proteinC.G.S.X.
0.068e-444Triticum aestivumTa.7028.1.A1_atBJ314138--8e+0At5g142003-isopropylmalate dehydrogenase, chloroplast, putativeC.G.S.X.
0.042e-134Vitis vinifera1614452_atBQ798156--6e-3At2g05900SDG11 (SET DOMAIN-CONTAINING PROTEIN 11)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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