CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.6763.4.S1_at

Gene name hypothetical protein LOC100279574

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.6763.4.S1_at BG841872 hypothetical protein LOC100279574 - 8e-6 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) S.X. H.G.
0.91 99.0 Zm.12188.1.A1_at BM382754 - - 1e+0 At5g51120 PABN1 (POLYADENYLATE-BINDING PROTEIN 1) S.X. H.G.
0.77 92.1 Zm.17577.1.S1_a_at AY108847.1 gibberellin-regulated protein 2 - 7e-3 At2g27250 CLV3 (CLAVATA3) S.X. H.G.
0.67 85.8 Zm.4862.1.S1_a_at CF629721 hypothetical protein LOC100273666 - 2e-27 At4g27230 HTA2 (histone H2A) S.X. H.G.
0.57 75.1 Zm.17163.1.A1_at BM378304 - - 1e+0 At2g24870 self-incompatibility protein-related S.X. H.G.
0.46 58.4 Zm.4333.1.A1_at AY104402.1 - - 9e-20 At4g33090 APM1 (AMINOPEPTIDASE M1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.7 95.4 GSM253269 ZM_4.5d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.5 95.1 GSM253268 ZM_4.5d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.5 95.1 GSM253262 ZM_4d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.4 94.9 GSM253263 ZM_4d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.4 94.9 GSM253257 ZM_2d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.3 94.7 GSM253256 ZM_2d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.2 94.5 GSM253261 ZM_2d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.2 94.5 GSM253260 ZM_2d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.1 94.3 GSM253270 ZM_4.5d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.1 94.3 GSM253258 ZM_2d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.93 0 1312 Zm.6763.4.S1_a_at BG841872 hypothetical protein LOC100279574 /// ribulose bisphosphate carboxylase small subunit1 - 8e-6 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) C.G. S.X.
0.47 0 862 Zm.6763.1.S1_at D00170.1 ribulose bisphosphate carboxylase small subunit1 - 2e-3 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) C.G. S.X.
0.02 5e-2 38 Zm.4059.1.A1_at CA828131 endoglucanase 1 - 8e+0 At3g52155 - C.G. S.X.
0.03 2e-1 36 Zm.7869.1.A1_at BM080228 calmodulin binding protein - 2e+1 At5g26731 unknown protein C.G. S.X.
0.02 2e-1 36 Zm.6830.1.S1_at AI820250 peptidyl-prolyl cis-trans isomerase CYP19-3 - 8e-3 At4g38740 ROC1 (ROTAMASE CYP 1) C.G. S.X.
0.02 2e-1 36 Zm.1939.1.A1_at BG841657 - - 6e-1 At1g35140 PHI-1 (PHOSPHATE-INDUCED 1) C.G. S.X.
0.01 8e-1 34 Zm.990.1.A1_at CF636054 - - 1e+1 At5g44345 F-box family protein-related C.G. S.X.
0.02 8e-1 34 Zm.889.2.S1_at CD439290 - - 4e-20 At4g38740 ROC1 (ROTAMASE CYP 1) C.G. S.X.
0.02 8e-1 34 Zm.889.1.A1_s_at M55021.1 - - 2e-12 At4g38740 ROC1 (ROTAMASE CYP 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 8e-6 52 Arabidopsis thaliana At1g67090 843029 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) F:ribulose-bisphosphate carboxylase activity, copper ion binding;P:response to blue light, response to cold, carbon utilization by fixation of carbon dioxide, response to red light, response to far red light;C:in 10 components;POB - - - C.G. S.X.
0.17 2e-13 77 Glycine max Gma.289.1.S1_x_at AF303941.1 ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 /// ribulose-1,5-bisphosphate carboxylase small subunit /// ribulose-1,5-bisphosphate carboxylase small subunit - 7e-34 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) C.G. S.X.
0.42 2e-42 173 Hordeum vulgare Contig594_x_at Contig594 - - 1e-7 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) C.G. S.X.
0.36 5e-24 113 Oryza sativa Os12g0292400 AK070257.1 - Petunia ribulose 1,5-bisphosphate carboxylasesmall subunit mRNA (clone pSSU 51), partial cds.(Fragment) 3e-7 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) C.G. S.X.
0.05 5e-5 50 Populus trichocarpa PtpAffx.249.15.A1_x_at CV237039 hypothetical protein - 2e-28 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) C.G. S.X.
0.40 6e-44 178 Triticum aestivum Ta.2752.2.S1_x_at BE216923 - - 6e-13 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) C.G. S.X.
0.08 7e-13 73 Vitis vinifera 1613936_x_at CF568996 - - 8e-24 At5g38410 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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