CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.6671.3.S1_at

Gene name hypothetical protein LOC100273935

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 71.6 Zm.6671.3.S1_at CO519752 hypothetical protein LOC100273935 - 2e-3 At1g02335 GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.) S.X. H.G.
0.50 65.7 Zm.12272.1.A1_at BM351641 - - 3e+0 At4g16240 unknown protein S.X. H.G.
0.38 44.2 Zm.18443.1.A1_at CD568469 - - 8e+0 At4g16442 integral membrane family protein S.X. H.G.
0.36 41.3 Zm.3206.1.A1_at BE639569 ATMAP70-3 - 1e-1 At1g24764 ATMAP70-2 (microtubule-associated proteins 70-2) S.X. H.G.
0.33 36.0 Zm.13519.1.A1_at AY108464.1 - - 3e-5 At4g32070 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein S.X. H.G.
0.28 28.1 Zm.17737.1.S1_at CK370687 - - 6e-3 At5g28560 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
25.3 99.6 GSM253246 ZM_12h_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
16.4 99.0 GSM323172 Zm_SG200Dpep1_24hpi_III GSE12892 Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
14.2 98.8 GSM253249 ZM_12h_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
9.8 98.3 GSM253248 ZM_12h_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
8.7 98.1 GSM323170 Zm_SG200Dpep1_24hpi_I GSE12892 Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
8.3 98.0 GSM290555 CCR mutant M1 with array type maize from Affymetrix GSE11531 Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
7.1 97.7 GSM290556 CCR mutant M2 with array type maize from Affymetrix GSE11531 Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
6.5 97.5 GSM290554 WS2 with array type maize from Affymetrix GSE11531 Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
6.3 97.4 GSM290553 WS1 with array type maize from Affymetrix GSE11531 Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
6.2 97.4 GSM385709 Deep-sowing 10d treatment TIBA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.45 5e-132 470 Zm.6671.1.S1_a_at BM379927 germin-like protein 1 - 7e+0 At3g23167 LCR39 (Low-molecular-weight cysteine-rich 39) C.G. S.X.
0.13 1e-21 103 Zm.8357.1.A1_at BM267266 - - 1e-4 At3g62020 GLP10 (GERMIN-LIKE PROTEIN 10) C.G. S.X.
0.15 2e-17 89 Zm.842.1.A1_at BM337077 hypothetical protein LOC100273345 - 8e-3 At5g38910 germin-like protein, putative C.G. S.X.
0.12 8e-17 87 Zm.11238.1.A1_at BM340814 - - 5e-3 At5g39100 GLP6 (GERMIN-LIKE PROTEIN 6) C.G. S.X.
0.09 3e-7 56 Zm.503.1.A1_at CK827179 germin-like protein 2 - 1e-1 At1g77750 30S ribosomal protein S13, chloroplast, putative C.G. S.X.
0.02 3e-4 46 Zm.3095.1.S1_at CO524214 hypothetical protein LOC100192080 - 4e-2 At5g17820 peroxidase 57 (PER57) (P57) (PRXR10) C.G. S.X.
0.03 4e-3 42 Zm.12518.1.A1_at CA452751 hypothetical protein LOC100191976 - 4e-1 At1g72610 GER1 (GERMIN-LIKE PROTEIN 1) C.G. S.X.
0.02 2e-2 40 Zm.9047.1.A1_at BM266786 - - 2e+0 At5g25840 unknown protein C.G. S.X.
0.02 2e-2 40 Zm.3895.1.A1_at BM079254 hypothetical protein LOC100272890 - 1e-30 At3g50820 PSBO2 (PHOTOSYSTEM II SUBUNIT O-2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 2e-3 44 Arabidopsis thaliana At1g02335 3766642 GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.) F:manganese ion binding, nutrient reservoir activity;P:unknown;C:endomembrane system, apoplast;PBFO - - - C.G. S.X.
0.02 8e-1 36 Glycine max PsAffx.C41000004_at PsAffx.C41000004 - - 9e-2 At2g30560 glycine-rich protein C.G. S.X.
0.48 1e-114 412 Hordeum vulgare Contig13065_at Contig13065 - - 1e-4 At1g02335 GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.) C.G. S.X.
0.49 0 642 Oryza sativa Os01g0284500 AF032974.1 - Nectarin 1 precursor (EC 1.15.1.1) (Superoxidedismutase [Mn]) 7e-3 At1g02335 GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.) C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.43837.1.A1_s_at CV256587 hypothetical protein - 3e-6 At4g24026 unknown protein C.G. S.X.
0.45 4e-119 428 Triticum aestivum TaAffx.113024.1.S1_s_at CA621356 - - 2e+1 At3g27270 - C.G. S.X.
0.02 4e-2 38 Vitis vinifera 1614347_at CF513585 hypothetical protein LOC100250375 - 1e-1 At4g20290 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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