CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.6644.2.A1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 79.5 Zm.6644.2.A1_at AY109212.1 - - 4e+0 At5g42050 - S.X. H.G.
0.67 85.8 Zm.4335.3.A1_at AY109325.1 - - 1e-3 At2g24050 MIF4G domain-containing protein / MA3 domain-containing protein S.X. H.G.
0.60 77.8 Zm.6054.2.S1_at AY104332.1 - - 6e-4 At2g41740 VLN2 (VILLIN 2) S.X. H.G.
0.57 75.1 Zm.15852.2.A1_at AY108720.1 - - 1e-41 At5g03430 phosphoadenosine phosphosulfate (PAPS) reductase family protein S.X. H.G.
0.50 65.7 Zm.18276.1.A1_at CO532399 dihydroneopterin aldolase - 2e+0 At1g78800 glycosyl transferase family 1 protein S.X. H.G.
0.44 55.7 Zm.15678.1.A1_at CD440195 hypothetical protein LOC100192926 - 7e+0 At4g18280 glycine-rich cell wall protein-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.9 97.7 GSM206303 Upper pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.7 97.6 GSM206309 Lower pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.9 97.3 GSM206327 Upper pulvinus 30 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.3 96.9 GSM206315 Upper pulvinus 30 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.3 96.9 GSM206328 Upper pulvinus 60 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.2 96.9 GSM206316 Upper pulvinus 60 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.1 96.8 GSM206334 Lower pulvinus 60 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.9 96.7 GSM206333 Lower pulvinus 30 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.6 96.4 GSM206304 Upper pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.4 96.2 GSM206302 Upper pulvinus 15 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 4e-103 373 Zm.6644.1.S1_at AY104341.1 hypothetical protein LOC100191256 - 2e-4 At5g42050 - C.G. S.X.
0.26 7e-34 143 Zm.17584.1.S1_at CK369026 - - 8e-5 At5g42050 - C.G. S.X.
0.02 5e-1 34 Zm.4785.1.S1_at AI691578 hypothetical protein LOC100194397 - 7e-1 At2g19385 zinc ion binding C.G. S.X.
0.01 5e-1 34 Zm.17533.2.A1_at CK347975 hypothetical protein LOC100191888 - 6e-5 At5g17380 pyruvate decarboxylase family protein C.G. S.X.
0.02 2e+0 32 Zm.9565.1.A1_at BM381516 beta-expansin 3 - 6e-1 At4g19270 unknown protein C.G. S.X.
0.01 2e+0 32 Zm.655.1.A1_at AF318580.1 Glk1 protein - 1e-6 At5g44190 GLK2 (GOLDEN2-LIKE 2) C.G. S.X.
0.01 2e+0 32 Zm.1415.1.A1_at BG840912 hypothetical protein LOC100191304 - 3e-9 At5g67400 peroxidase 73 (PER73) (P73) (PRXR11) C.G. S.X.
0.02 2e+0 32 Zm.13580.1.A1_at AI677218 lipase - 4e-1 At4g14270 - C.G. S.X.
0.02 2e+0 32 Zm.13067.1.A1_at CA404030 hypothetical protein LOC100216884 - 5e-1 At4g17550 transporter-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e+0 32 Arabidopsis thaliana At5g42050 834210 - F:molecular_function unknown;P:unknown;C:unknown;OMPFBV - - - C.G. S.X.
0.13 6e-3 42 Glycine max Gma.10950.1.S1_at BI699798 - - 2e-15 At3g27090 - C.G. S.X.
0.16 4e-54 210 Hordeum vulgare Contig3841_at Contig3841 - - 3e-12 At5g42050 - C.G. S.X.
0.22 6e-50 198 Oryza sativa Os01g0550300 AK106151.1 - Conserved hypothetical protein 2e-22 At3g06720 IMPA-1 (IMPORTIN ALPHA ISOFORM 1) C.G. S.X.
0.06 4e-4 46 Populus trichocarpa Ptp.6180.1.S1_s_at BU819271 hypothetical protein - 3e-11 At5g42050 - C.G. S.X.
0.28 4e-62 238 Triticum aestivum TaAffx.30426.1.S1_at CA625402 - - 3e-4 At5g42050 - C.G. S.X.
0.04 6e-12 69 Vitis vinifera 1613540_s_at CB344558 similar to B2 protein - 2e-23 At5g42050 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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