CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.6614.1.A1_at

Gene name coronatine-insensitive protein 1

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 81.1 Zm.6614.1.A1_at CO533019 coronatine-insensitive protein 1 - 1e+0 At2g26030 F-box family protein S.X. H.G.
0.80 94.0 Zm.7126.2.S1_at AY110592.1 - - 2e-9 At3g51460 RHD4 (ROOT HAIR DEFECTIVE4) S.X. H.G.
0.75 90.8 Zm.14497.8.A1_s_at CO527469 60S ribosomal protein L27 /// 60S ribosomal protein L27 - 2e-6 At3g22230 60S ribosomal protein L27 (RPL27B) S.X. H.G.
0.71 88.2 Zm.4061.1.S1_at AI834355 - - 3e+0 At3g25030 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.59 76.1 Zm.2142.1.A1_at CK369102 hypothetical protein LOC100191429 - 1e-8 At2g42880 ATMPK20 S.X. H.G.
0.47 59.9 Zm.7127.1.A1_at BM266653 nonspecific lipid-transfer protein - 8e+0 At5g53300 UBC10 (ubiquitin-conjugating enzyme 10) S.X. H.G.
0.42 51.3 Zm.221.1.A1_at U28376.1 calcium-dependent protein kinase - 4e-25 At3g20410 CPK9 (calmodulin-domain protein kinase 9) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.0 98.0 GSM206330 Lower pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
7.4 97.8 GSM206307 Lower pulvinus 5 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.1 97.4 GSM206305 Right pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.0 97.3 GSM206299 Left pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.3 96.9 GSM206295 Lower pulvinus 5 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.7 96.5 GSM206300 Upper pulvinus 2 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.7 96.5 GSM206324 Upper pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.7 96.5 GSM206306 Lower pulvinus 2 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.0 95.8 GSM206318 Lower pulvinus 2 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.9 95.7 GSM206302 Upper pulvinus 15 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.31 2e-114 412 Zm.979.1.S1_at BE638693 - - 2e+1 At5g08320 unknown protein C.G. S.X.
0.06 9e-12 71 ZmAffx.62.1.A1_at AI665108 coronatine-insensitive protein 1 - 3e+0 At2g01370 DNA-binding storekeeper protein-related C.G. S.X.
0.06 9e-12 71 ZmAffx.62.1.S1_at AI665108 - - 3e+0 At2g01370 DNA-binding storekeeper protein-related C.G. S.X.
0.04 8e-6 52 Zm.17237.1.S1_at CF635241 - - 1e+0 At1g80865 unknown protein C.G. S.X.
0.02 2e-3 44 Zm.2213.1.A1_at CO533465 - - 6e+0 At4g30550 glutamine amidotransferase class-I domain-containing protein C.G. S.X.
0.01 1e-1 38 Zm.4325.1.A1_at AI855133 hypothetical protein LOC100193570 - 2e+0 At3g45851 unknown protein C.G. S.X.
0.01 5e-1 36 Zm.369.1.A1_at AF035460.1 low molecular weight heat shock protein precursor - 9e-3 At4g25200 ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6) C.G. S.X.
0.01 2e+0 34 Zm.8476.1.A1_at AY105238.1 secondary cell wall-related glycosyltransferase family 47 - 3e-14 At5g61840 GUT1 C.G. S.X.
0.01 2e+0 34 Zm.5799.1.A1_at AI649714 gamma-tocopherol methyltransferase - 8e-13 At1g64970 G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e+0 36 Arabidopsis thaliana At2g26030 817144 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB - - - C.G. S.X.
0.02 1e-1 40 Glycine max PsAffx.C955000001_at PsAffx.C955000001 - - 1e+0 At1g23390 kelch repeat-containing F-box family protein C.G. S.X.
0.52 1e-100 367 Hordeum vulgare Contig5166_at Contig5166 - - 7e-2 At2g39940 COI1 (CORONATINE INSENSITIVE 1) C.G. S.X.
0.50 9e-111 402 Oryza sativa Os01g0853400 AY168645.1 - Coronatine-insensitive 1 2e-2 At2g39940 COI1 (CORONATINE INSENSITIVE 1) C.G. S.X.
0.04 2e+0 36 Populus trichocarpa Ptp.2425.1.S1_at CV226591 f-box family protein - 7e-2 At2g39940 COI1 (CORONATINE INSENSITIVE 1) C.G. S.X.
0.49 2e-73 278 Triticum aestivum Ta.6322.2.S1_a_at BQ170714 - - 1e+0 At5g14930 SAG101 (SENESCENCE-ASSOCIATED GENE 101) C.G. S.X.
0.01 1e+0 34 Vitis vinifera 1607104_at BQ793780 hypothetical protein LOC100267573 - 3e-19 At1g34020 transporter-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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