Gene omics information

Query gene ID	Zm.6557.1.S1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	94.0	Zm.6557.1.S1_at	CF635193	-	-	4e-34	At1g10290	ADL6 (DYNAMIN-LIKE PROTEIN 6)	S.X.	H.G.	Please select
0.60	77.8		-	-	-	0			S.X.	H.G.	Please select
0.50	65.7	Zm.18993.1.S1_at	CO528827	-	-	3e-3	At2g10950	BSD domain-containing protein	S.X.	H.G.	Please select
0.44	55.7	Zm.13658.1.A1_at	AY107148.1	hypothetical protein LOC100193262	-	1e+0	At3g50350	unknown protein	S.X.	H.G.	Please select
0.35	38.9	Zm.2427.1.S1_at	AY108148.1	hypothetical protein LOC100217316	-	1e-3	At2g43970	La domain-containing protein	S.X.	H.G.	Please select
0.32	33.4	Zm.8902.1.A1_at	CD441345	glycosyltransferase-like	-	6e-11	At1g18690	transferase/ transferase, transferring glycosyl groups	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.0	95.8	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
4.0	95.8	GSM202290	Mo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.7	95.4	GSM205373	Mo17 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.6	95.2	GSM205369	Mo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.5	95.1	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.5	95.1	GSM205365	Mo17 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.5	95.1	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.4	94.9	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.1	94.3	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis
2.9	93.8	GSM290554	WS2 with array type maize from Affymetrix	GSE11531	Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.29	1e-84	313	Zm.18377.1.A1_at	CF624954	-	-	2e-13	At1g10290	ADL6 (DYNAMIN-LIKE PROTEIN 6)	C.G.	S.X.	Please select
0.10	1e-44	180	Zm.6557.2.A1_at	AW461001	-	-	1e+0	Atmg00970	-	C.G.	S.X.	Please select
0.01	1e-1	38	Zm.4127.1.A1_at	AI855047	hypothetical protein LOC100216901	-	4e+0	At4g11980	ATNUDX14 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 14)	C.G.	S.X.	Please select
0.01	1e-1	38	Zm.13597.1.A1_at	CF630886	hydrolase/ protein serine/threonine phosphatase	-	7e-1	At1g13900	calcineurin-like phosphoesterase family protein	C.G.	S.X.	Please select
0.01	5e-1	36	Zm.4052.1.A1_at	BM335096	hypothetical protein LOC100273077	-	6e-1	At1g03260	-	C.G.	S.X.	Please select
0.01	5e-1	36	Zm.14398.1.A1_at	CF629861	protein OS-9	-	2e-3	At3g55680	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.01	5e-1	36	Zm.13957.1.A1_at	AY107579.1	hypothetical protein LOC100272636	-	2e+0	At4g33640	unknown protein	C.G.	S.X.	Please select
0.01	5e-1	36	Zm.13957.1.S1_at	BI993086	-	-	2e+0	At4g33640	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	34	ZmAffx.745.1.A1_at	AI745776	-	-	3e+0	At5g17650	glycine/proline-rich protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.25	4e-34	147	Arabidopsis thaliana	At1g10290	837568	ADL6 (DYNAMIN-LIKE PROTEIN 6)	involved in trafficking from the trans-Golgi Network to the central vacuole.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.21	4e-26	121	Glycine max	Gma.2787.1.S1_s_at	BG510112	-	-	6e-17	At1g10290	ADL6 (DYNAMIN-LIKE PROTEIN 6)	C.G.	S.X.	Please select
0.63	6e-152	537	Hordeum vulgare	Contig4502_at	Contig4502	-	-	4e-31	At1g59610	ADL3 (ARABIDOPSIS DYNAMIN-LIKE 3)	C.G.	S.X.	Please select
0.55	0	847	Oryza sativa	Os06g0247800	AK102187.1	-	Dynamin-like protein (Fragment)	2e-30	At1g10290	ADL6 (DYNAMIN-LIKE PROTEIN 6)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.30	2e-46	188	Populus trichocarpa	PtpAffx.215562.1.S1_x_at	pmrna29828	hypothetical protein	-	1e-56	At1g59610	ADL3 (ARABIDOPSIS DYNAMIN-LIKE 3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.57	2e-159	563	Triticum aestivum	Ta.1822.1.S1_at	CK209268	dynamin like Pr6(ADL6)	-	4e-16	At1g59610	ADL3 (ARABIDOPSIS DYNAMIN-LIKE 3)	C.G.	S.X.	Please select
0.16	2e-33	143	Vitis vinifera	1607472_at	CF208707	hypothetical protein LOC100255051	-	6e-23	At1g59610	ADL3 (ARABIDOPSIS DYNAMIN-LIKE 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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