Gene omics information

Query gene ID	Zm.6522.2.A1_a_at
Gene name	mpv17 / PMP22 family protein
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.6522.2.A1_a_at	AY108423.1	mpv17 / PMP22 family protein	-	2e-4	At1g52870	peroxisomal membrane protein-related	S.X.	H.G.	Please select
0.63	81.1	Zm.12365.1.S1_at	AY106477.1	hypothetical protein LOC100193020	-	6e-1	At1g69680	-	S.X.	H.G.	Please select
0.50	65.7	Zm.6521.1.A1_at	AW067094	protein binding protein	-	7e-5	At1g68820	membrane protein, putative	S.X.	H.G.	Please select
0.46	58.4	Zm.4339.1.A1_at	AI711931	-	-	1e+0	At1g47410	unknown protein	S.X.	H.G.	Please select
0.29	28.1	Zm.13619.1.A1_at	CF630917	hypothetical protein LOC100192497 /// serine/threonine-protein kinase SAPK2 /// serine/threonine-protein kinase SAPK2	-	1e-30	At4g33950	OST1 (OPEN STOMATA 1)	S.X.	H.G.	Please select
0.08	3.4	Zm.7276.1.S1_at	BI674107	FLU	-	1e-2	At3g14110	FLU (FLUORESCENT IN BLUE LIGHT)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
42.6	99.9	GSM253276	ZM_8d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
39.1	99.9	GSM253274	ZM_8d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
19.5	99.3	GSM253275	ZM_8d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
15.9	99.0	GSM258172	B37 11-day seedling aerial tissue biological replicate 1	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
15.6	99.0	GSM253270	ZM_4.5d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
12.5	98.7	GSM253268	ZM_4.5d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
11.4	98.5	GSM253264	ZM_4d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
10.0	98.4	GSM258181	B37 11-day seedling aerial tissue biological replicate 2	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
8.6	98.1	GSM253269	ZM_4.5d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
8.5	98.1	GSM258190	B37 11-day seedling aerial tissue biological replicate 3	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.91	0	1184	Zm.6522.2.A1_at	AY108423.1	hypothetical protein LOC100216568	-	2e-4	At1g52870	peroxisomal membrane protein-related	C.G.	S.X.	Please select
0.43	0	745	Zm.6522.1.A1_x_at	AI745745	Hypothetical protein LOC100216568	-	3e-15	At4g03410	peroxisomal membrane protein-related	C.G.	S.X.	Please select
0.04	3e-17	89	Zm.3561.1.A1_at	CK826673	hypothetical protein LOC100275649	-	1e-2	At4g03410	peroxisomal membrane protein-related	C.G.	S.X.	Please select
0.03	1e-4	48	Zm.8720.2.A1_a_at	BM267300	UDP-glucose-4-epimerase	-	5e+0	At5g16486	-	C.G.	S.X.	Please select
0.02	2e-2	40	Zm.2832.1.A1_at	AY112553.1	-	-	5e-1	At5g61270	PIF7 (PHYTOCHROME-INTERACTING FACTOR7)	C.G.	S.X.	Please select
0.02	2e+0	34	Zm.9814.1.A1_at	BM351590	-	-	4e+0	At5g26840	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.9019.1.A1_at	CO523438	hypothetical protein LOC100217020	-	2e-7	At3g63260	ATMRK1	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.8721.1.A1_at	BM339688	catalytic/ oxidoreductase, acting on NADH or NADPH	-	3e-1	At1g10530	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.11322.1.S1_at	AI637083	hypothetical protein LOC100216791	-	4e+0	At1g16840	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.19	2e-4	48	Arabidopsis thaliana	At1g52870	841720	peroxisomal membrane protein-related	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, chloroplast;MPFO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.20	1e-19	99	Glycine max	GmaAffx.82478.1.S1_at	BF009019	-	-	2e-42	At4g03410	peroxisomal membrane protein-related	C.G.	S.X.	Please select
0.36	5e-84	311	Hordeum vulgare	Contig7256_at	Contig7256	-	-	4e-8	At1g52870	peroxisomal membrane protein-related	C.G.	S.X.	Please select
0.40	1e-136	488	Oryza sativa	Os03g0583800	AK064786.1	-	Mpv17/PMP22 family protein	1e-8	At1g52870	peroxisomal membrane protein-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.12	3e-7	57	Populus trichocarpa	PtpAffx.215243.1.S1_at	pmrna29321	hypothetical protein	-	7e-52	At4g03410	peroxisomal membrane protein-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.40	0	783	Triticum aestivum	Ta.26361.1.A1_at	CD490836	-	-	6e-3	At1g52870	peroxisomal membrane protein-related	C.G.	S.X.	Please select
0.09	7e-11	67	Vitis vinifera	1613841_s_at	CF512555	hypothetical protein LOC100253839	-	1e-20	At1g52870	peroxisomal membrane protein-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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