Gene omics information

Query gene ID Zm.6315.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6077.8Zm.6315.1.A1_atAI691364--2e-1At1g44830AP2 domain-containing transcription factor TINY, putativeS.X.H.G.
0.8294.6Zm.18426.1.A1_atCO529693hypothetical protein LOC100274338-5e-8At1g06890transporter-relatedS.X.H.G.
0.7288.6Zm.10751.1.A1_atBQ539382--4e+0At3g12600atnudt16 (Arabidopsis thaliana Nudix hydrolase homolog 16)S.X.H.G.
0.7188.2Zm.1324.1.A1_atAY106711.1hypothetical protein LOC100274108-1e-1At4g02050sugar transporter, putativeS.X.H.G.
0.6986.5Zm.2183.1.A1_atBM335799phospholipase/Carboxylesterase family protein-6e+0At4g36640SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinS.X.H.G.
0.6785.8Zm.12352.1.S1_atCF029529--1e+0At1g78660gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putativeS.X.H.G.
0.6481.7Zm.1494.1.S1_atAY105986.1hypothetical protein LOC100279492-1e-2At2g20825ULT2 (ULTRAPETALA 2)S.X.H.G.
0.5674.4Zm.1157.1.A1_atCF630858--4e-1At3g56890F-box family protein-relatedS.X.H.G.
0.5369.1ZmAffx.1086.1.A1_atAW018229--3e+0At2g01755unknown proteinS.X.H.G.
0.5065.7Zm.7409.1.A1_atCF042542hypothetical protein LOC100191559-2e-1At4g15790unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
68.1100.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
38.499.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.399.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.399.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.899.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.499.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.198.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.498.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.997.7GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.497.0GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-340Zm.1920.1.A1_a_atBM332434hypothetical protein AY109668 /// hypothetical protein LOC100273332 /// hypothetical protein LOC100275218-7e-4At3g05550hypoxia-responsive family proteinC.G.S.X.
0.039e-236Zm.14849.1.A1_atAW256200--4e-4At1g10550XTH33C.G.S.X.
0.029e-236Zm.1291.1.S1_atCO533162hypothetical protein LOC100194121-1e-5At5g62460zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.029e-236Zm.10436.1.S1_atCF008798--2e-13At2g07560AHA6 (Arabidopsis H(+)-ATPase 6)C.G.S.X.
0.043e-134ZmAffx.693.1.A1_atAI737419hypothetical protein LOC100191981-8e-1At5g24130unknown proteinC.G.S.X.
0.043e-134ZmAffx.693.1.S1_atAI737419Hypothetical protein LOC100191981-8e-1At5g24130unknown proteinC.G.S.X.
0.023e-134Zm.14365.1.A1_atCO5345095S rRNA binding protein-2e+0At1g07950surfeit locus protein 5 family protein / SURF5 family proteinC.G.S.X.
0.023e-134Zm.13862.2.S1_atAY270039.1Na+/H+ antiporter NHX4-5e-2At3g06370NHX4 (SODIUM HYDROGEN EXCHANGER 4)C.G.S.X.
0.031e+032Zm.9731.1.A1_atBM337122--3e-1At3g11820SYP121 (SYNTAXIN OF PLANTS 121)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-136Arabidopsis thalianaAt1g44830841047AP2 domain-containing transcription factor TINY, putativeencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.---C.G.S.X.
0.051e-344Glycine maxGmaAffx.84479.1.S1_atAI736688--9e-10At3g13690protein kinase family proteinC.G.S.X.
0.041e-136Hordeum vulgareHVSMEf0004P17f_atHVSMEf0004P17f--6e-2At1g79920ATP bindingC.G.S.X.
0.031e-448Oryza sativaOs02g08054009630.m05572-Galactose oxidase, central domain containingprotein9e+0At5g55570unknown proteinC.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.222000.1.S1_atpmrna39184hypothetical protein-3e+0At5g10580unknown proteinC.G.S.X.
0.042e-136Triticum aestivumTaAffx.86616.1.S1_atCA604395--4e+0At3g58100PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5)C.G.S.X.
0.049e-132Vitis vinifera1618713_atCA813649--4e+0At5g45890SAG12 (SENESCENCE-ASSOCIATED GENE 12)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage