Gene omics information

Query gene ID Zm.6307.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6785.8Zm.6307.1.A1_atAI691328--7e-32At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)S.X.H.G.
0.4455.7Zm.9263.1.A1_atBM347538--2e+0At1g64405unknown proteinS.X.H.G.
0.2724.6Zm.16694.1.A1_a_atZ14994.1--2e-11At5g53740unknown proteinS.X.H.G.
0.2014.2Zm.12531.1.A1_atAI740174--2e+0At3g27328unknown proteinS.X.H.G.
0.169.4Zm.5131.1.A1_atAI600972--5e+0At5g49620AtMYB78 (myb domain protein 78)S.X.H.G.
0.072.9Zm.13884.1.S1_atCO524780hypothetical protein LOC100279722-5e-20At4g38620MYB4S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.898.1GSM253270ZM_4.5d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
7.997.9GSM253269ZM_4.5d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
6.997.7GSM253268ZM_4.5d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
5.797.2GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
3.895.5GSM253271ZM_4.5d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
3.595.1GSM202277Mo17 11-day seedling aerial tissue biological replicate 1GSE8174Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
3.394.7GSM202282B73 11-day seedling aerial tissue biological replicate 2GSE8174Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
3.194.3GSM202284B73xMo17 11-day seedling aerial tissue biological replicate 2GSE8174Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
3.094.0GSM202406Zmet2 study 11-day seedling aerial tissue genotype Mo17 Rep2GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
3.094.0GSM205436B73xMo17 19 DAP endosperm tissue biological replicate 3GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.520938Zm.12513.1.A1_atAW000088hypothetical protein LOC100274471-4e-32At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)C.G.S.X.
0.296e-1581Zm.3996.1.S1_atCD436900hypothetical protein LOC100274383-2e-11At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)C.G.S.X.
0.022e-550Zm.6486.1.S1_atCO531538hypothetical protein LOC100273633-7e-29At3g54180CDKB1C.G.S.X.
0.022e-550Zm.4056.1.A1_atCA403994hypothetical protein LOC100192464-3e+0At4g01080unknown proteinC.G.S.X.
0.012e-550Zm.2199.1.A1_atAI734621transaldolase 2-1e-9At5g13420transaldolase, putativeC.G.S.X.
0.012e-550Zm.2199.1.A1_a_atAI734621transaldolase 2-1e-9At5g13420transaldolase, putativeC.G.S.X.
0.022e-550Zm.17544.1.A1_atCF004915thylakoid membrane phosphoprotein 14 kda-3e-2At2g46820PSI-P (PHOTOSYSTEM I P SUBUNIT)C.G.S.X.
0.022e-550Zm.16700.1.A1_atAY107355.1--3e-21At5g48460fimbrin-like protein, putativeC.G.S.X.
0.022e-550Zm.15427.1.S1_atAY105319.1hypothetical protein LOC100193429-6e-1At5g02260ATEXPA9 (ARABIDOPSIS THALIANA EXPANSIN A9)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.517e-32139Arabidopsis thalianaAt2g39770818562CYT1 (CYTOKINESIS DEFECTIVE 1)Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.---C.G.S.X.
0.223e-35151Glycine maxGmaAffx.74155.1.S1_atAW396307--6e-30At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)C.G.S.X.
0.630979Hordeum vulgareContig8080_atContig8080--3e-28At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)C.G.S.X.
0.520999Oryza sativaOs01g0847200CB674427-Mannose-1-phosphate guanyltransferase (EC2.7.7.13) (ATP-mannose-1- phosphate guanylyltransferase)(GDP-mannose pyrophosphorylase) (NDP- hexosepyrophosphorylase)4e-37At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)C.G.S.X.
0.376e-27123Populus trichocarpaPtp.615.1.S1_s_atCV255021hypothetical protein-3e-80At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)C.G.S.X.
0.6101019Triticum aestivumTa.7474.1.S1_atBJ285075--3e-28At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)C.G.S.X.
0.352e-79295Vitis vinifera1622606_atCB910226GDP-D-mannose pyrophosphorylase-4e-157At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage