Gene omics information

Query gene ID	Zm.6306.2.A1_at
Gene name	Protein kinase catalytic domain
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.6306.2.A1_at	AI691326	Protein kinase catalytic domain	-	1e-10	At1g35670	ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)	S.X.	H.G.	Please select
0.73	89.9	ZmAffx.225.1.S1_at	AI670237	-	-	1e+1	At5g09470	mitochondrial substrate carrier family protein	S.X.	H.G.	Please select
0.60	77.8	Zm.8110.1.A1_at	CF623866	hypothetical protein LOC100278802	-	3e-25	At5g49820	emb1879 (embryo defective 1879)	S.X.	H.G.	Please select
0.50	65.7	Zm.4426.1.A1_at	CF017278	hypothetical protein LOC100273544	-	1e+0	At1g78020	senescence-associated protein-related	S.X.	H.G.	Please select
0.40	48.5	Zm.19299.1.A1_at	BM074654	-	-	4e-3	At4g09270	unknown protein	S.X.	H.G.	Please select
0.21	15.5	Zm.5451.1.S1_at	AI621979	-	-	8e-4	At4g36970	remorin family protein	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.6	97.9	GSM202290	Mo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.8	97.2	GSM202295	Mo17xB73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.6	97.1	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.4	97.0	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.8	96.6	GSM202307	B73xMo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.8	96.6	GSM202302	B73xMo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.5	96.3	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.4	96.2	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.3	96.1	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.1	95.9	GSM206309	Lower pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.41	0	1053	Zm.6306.1.A1_a_at	AY301062.2	calcium-dependent protein kinase ZmCPK11	-	9e-17	At1g35670	ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)	C.G.	S.X.	Please select
0.41	0	1053	Zm.6306.1.A1_at	AY301062.2	calcium-dependent protein kinase ZmCPK11	-	9e-17	At1g35670	ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)	C.G.	S.X.	Please select
0.36	8e-50	196	Zm.12648.1.A1_at	CK347365	-	-	1e-7	At4g35310	CPK5 (calmodulin-domain protein kinase 5)	C.G.	S.X.	Please select
0.02	8e-4	44	Zm.20.1.S1_at	D84408.1	calcium dependent protein kinase	-	4e-25	At2g17290	CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)	C.G.	S.X.	Please select
0.02	5e-2	38	Zm.15805.1.S1_at	CD446166	-	-	3e+0	At5g40420	OLEO2 (OLEOSIN 2)	C.G.	S.X.	Please select
0.04	2e-1	36	Zm.17082.1.S1_s_at	AY108221.1	-	-	4e-12	At4g23650	CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)	C.G.	S.X.	Please select
0.04	2e-1	36	Zm.17082.1.S1_at	AY108221.1	-	-	4e-12	At4g23650	CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)	C.G.	S.X.	Please select
0.02	7e-1	34	Zm.873.1.S1_at	AW067411	-	-	3e-16	At4g38230	CPK26	C.G.	S.X.	Please select
0.02	7e-1	34	Zm.5793.1.S1_at	AY106408.1	-	-	8e-4	At5g04250	OTU-like cysteine protease family protein	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.19	1e-10	67	Arabidopsis thaliana	At1g35670	840471	ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)	Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.18	3e-21	103	Glycine max	Gma.8437.1.S1_at	AY247754.1	Calcium-dependent protein kinase SK5	-	8e-23	At5g23580	CDPK9 (CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9)	C.G.	S.X.	Please select
0.35	3e-151	533	Hordeum vulgare	Contig6447_at	Contig6447	-	-	4e-15	At1g35670	ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)	C.G.	S.X.	Please select
0.32	2e-69	264	Oryza sativa	Os12g0169800	9640.m00650	-	Calcium-dependent protein kinase SK5 (EC 2.7.1.-)(CDPK)	2e-8	At4g09570	CPK4	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.19	7e-10	65	Populus trichocarpa	PtpAffx.212106.1.S1_at	pmrna23742	calcium dependent protein kinase 12	-	5e-33	At5g23580	CDPK9 (CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.39	3e-82	305	Triticum aestivum	Ta.6350.2.S1_a_at	AW448037	calcium-dependent protein kinase /// calcium-dependent protein kinase	-	3e-4	At1g35670	ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)	C.G.	S.X.	Please select
0.25	7e-34	143	Vitis vinifera	1610635_at	CF214231	similar to calcium-dependent protein kinase	-	2e-12	At1g35670	ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage