CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.6295.1.A1_at

Gene name NADH-ubiquinone oxidoreductase B18 subunit

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 75.1 Zm.6295.1.A1_at AY107687.1 NADH-ubiquinone oxidoreductase B18 subunit - 2e+0 At3g55670 - S.X. H.G.
0.33 36.0 Zm.2862.2.A1_a_at AY112482.1 calnexin - 2e-44 At5g07340 calnexin, putative S.X. H.G.
0.24 19.8 Zm.7932.1.A1_at BM378311 hypothetical protein LOC100278269 - 2e-2 At5g20165 unknown protein S.X. H.G.
0.10 4.6 Zm.2417.1.A1_at BM338817 LSM7-like - 2e+0 At5g23290 PDF5 (PREFOLDIN 5) S.X. H.G.
0.07 2.9 Zm.5515.1.A1_at CF631927 - - 3e+0 At2g01580 unknown protein S.X. H.G.
0.06 2.3 Zm.15828.1.A1_at AI711977 - - 4e-29 At5g59240 40S ribosomal protein S8 (RPS8B) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.2 94.5 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2 94.5 GSM205371 Mo17xB73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.1 94.3 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.1 94.3 GSM205365 Mo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.7 93.2 GSM205367 Mo17xB73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.5 92.6 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.4 92.2 GSM202319 Mo17 19 day after pollination embryo tissue, biological replicate 3 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
2.4 92.2 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.2 91.3 GSM253251 ZM_24h_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
2.2 91.3 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-2 40 Zm.13191.1.S1_at CO519529 hypothetical protein LOC100279543 - 3e+0 At2g20260 PSAE-2 (photosystem I subunit E-2) C.G. S.X.
0.02 1e-2 40 Zm.1330.1.S1_at AY104880.1 hypothetical protein LOC100272442 - 4e-2 At4g31580 SRZ-22 C.G. S.X.
0.03 5e-2 38 Zm.6405.2.S1_at AI881398 - - 2e-1 At1g32540 LOL1 (LSD ONE LIKE 1) C.G. S.X.
0.03 5e-2 38 Zm.6405.2.A1_a_at AI881398 LOL1 - 2e-1 At1g32540 LOL1 (LSD ONE LIKE 1) C.G. S.X.
0.01 5e-2 38 Zm.3699.3.S1_at AI649477 hypothetical protein LOC100273816 - 4e-10 At3g13460 ECT2 C.G. S.X.
0.02 5e-2 38 Zm.10449.1.S1_at BQ528465 hypothetical protein LOC100274604 - 5e-4 At4g17670 senescence-associated protein-related C.G. S.X.
0.01 2e-1 36 Zm.5581.1.S1_at AF143447.1 rough sheath2 - 1e-15 At2g37630 AS1 (ASYMMETRIC LEAVES 1) C.G. S.X.
0.01 2e-1 36 Zm.1579.1.S1_at AY107917.1 AMP-binding protein - 3e-7 At1g77240 AMP-binding protein, putative C.G. S.X.
0.02 2e-1 36 Zm.12705.1.S1_at CD440320 - - 7e-10 At5g20160 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At3g55670 824733 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.22 1e-36 155 Glycine max Gma.6610.1.S1_s_at CD407497 - - 1e-3 At2g02050 NADH-ubiquinone oxidoreductase B18 subunit, putative C.G. S.X.
0.35 1e-113 408 Hordeum vulgare Contig4663_s_at Contig4663 - - 4e-1 At4g25330 unknown protein C.G. S.X.
0.42 3e-108 393 Oryza sativa Os03g0129900 AK059624.1 - NADH-ubiquinone oxidoreductase B18 subunit familyprotein 1e+0 At4g26820 - C.G. S.X.
0.10 7e-10 65 Populus trichocarpa Ptp.4068.1.A1_at CV263283 hypothetical protein - 7e-15 At2g02050 NADH-ubiquinone oxidoreductase B18 subunit, putative C.G. S.X.
0.38 2e-111 402 Triticum aestivum Ta.6902.3.S1_a_at CA652643 - - 2e-2 At2g30560 glycine-rich protein C.G. S.X.
0.16 5e-32 137 Vitis vinifera 1619570_at CB344569 hypothetical protein LOC100245635 - 7e-18 At2g02050 NADH-ubiquinone oxidoreductase B18 subunit, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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