Gene omics information

Query gene ID	Zm.6273.1.A1_at
Gene name	patellin-5
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	85.8	Zm.6273.1.A1_at	AY108611.1	patellin-5	-	2e-5	At3g51670	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	S.X.	H.G.	Please select
0.91	99.0	Zm.8552.1.A1_at	BM347529	hypothetical protein LOC100275365	-	1e+0	At1g35340	ATP-dependent protease La (LON) domain-containing protein	S.X.	H.G.	Please select
0.83	95.6	Zm.10224.2.S1_a_at	CF243959	hypothetical protein LOC100192800	-	1e-5	At3g11397	PRA1.A3 (PRENYLATED RAB ACCEPTOR 1.A3)	S.X.	H.G.	Please select
0.83	95.6	Zm.16759.1.A1_at	BM338376	lactoylglutathione lyase	-	1e-11	At1g08110	lactoylglutathione lyase, putative / glyoxalase I, putative	S.X.	H.G.	Please select
0.67	85.8	Zm.14438.1.A1_at	CO520860	VAMP-like protein YKT62	-	4e-12	At5g58180	ATYKT62	S.X.	H.G.	Please select
0.67	85.8	Zm.13343.1.S1_at	CA832209	Hypothetical protein LOC100192517	-	4e+1	At5g45880	pollen Ole e 1 allergen and extensin family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
15.7	99.0	GSM202307	B73xMo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
12.9	98.7	GSM202292	B73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
12.6	98.7	GSM202295	Mo17xB73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
12.3	98.7	GSM202306	Mo17xB73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
12.2	98.6	GSM202309	Mo17 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
10.7	98.5	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
10.7	98.5	GSM202324	Mo17xB73 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
10.4	98.4	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
10.0	98.4	GSM202319	Mo17 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
10.0	98.4	GSM202302	B73xMo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.93	0	2302	Zm.6273.1.A1_x_at	AY108611.1	patellin-5	-	2e-5	At3g51670	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	C.G.	S.X.	Please select
0.53	0	940	Zm.6273.2.A1_at	BQ487261	patellin-5	-	2e-3	At3g51670	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	C.G.	S.X.	Please select
0.28	7e-151	533	Zm.6273.3.A1_at	CO519360	-	-	7e+0	At5g57747	unknown protein	C.G.	S.X.	Please select
0.20	7e-151	533	Zm.6273.3.S1_at	CO519360	-	-	7e+0	At5g57747	unknown protein	C.G.	S.X.	Please select
0.04	7e-6	52	Zm.6066.1.A1_at	CF635836	-	-	2e-1	At1g30690	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	C.G.	S.X.	Please select
0.02	3e-5	50	Zm.4978.1.A1_at	AW331789	patellin-1	-	1e-1	At5g37590	binding	C.G.	S.X.	Please select
0.05	3e-5	50	Zm.17688.1.S1_at	CK370167	-	-	2e-1	At1g72160	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	C.G.	S.X.	Please select
0.07	4e-4	46	Zm.5494.1.A1_at	AI622241	hypothetical protein LOC100192106	-	5e-1	At3g51670	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.9174.1.A1_at	CD998621	hypothetical protein LOC100194027	-	1e+0	At5g06710	HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e-5	52	Arabidopsis thaliana	At3g51670	824330	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	F:transporter activity;P:transport;C:plasma membrane;MFPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	2e-2	42	Glycine max	GmaAffx.91686.1.S1_at	CF807411	-	-	9e-8	At3g51670	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	C.G.	S.X.	Please select
0.24	2e-37	157	Hordeum vulgare	Contig15596_at	Contig15596	-	-	1e+0	At2g20120	COV1 (CONTINUOUS VASCULAR RING)	C.G.	S.X.	Please select
0.62	0	872	Oryza sativa	Os05g0345100	9633.m02536	-	Cellular retinaldehyde binding/alpha-tocopheroltransport family protein	3e+0	At4g13940	MEE58 (MATERNAL EFFECT EMBRYO ARREST 58)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	1e-3	46	Populus trichocarpa	Ptp.5228.1.S1_at	BU836749	hypothetical protein	-	4e-32	At3g51670	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.58	0	765	Triticum aestivum	Ta.7324.1.S1_at	BQ170967	-	-	3e+0	At3g48590	NF-YC1 (NUCLEAR FACTOR Y, SUBUNIT C1)	C.G.	S.X.	Please select
0.10	2e-8	59	Vitis vinifera	1609486_at	CF207907	hypothetical protein LOC100246625	-	7e-47	At3g51670	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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