Gene omics information

Query gene ID	Zm.6264.1.S1_at
Gene name	Hypothetical protein LOC100191870
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.6264.1.S1_at	BG266134	Hypothetical protein LOC100191870	-	4e-34	At1g70300	KUP6	S.X.	H.G.	Please select
0.73	89.9	Zm.3022.1.A1_at	CF632756	hypothetical protein LOC100275367	-	1e-2	At5g42100	ATBG_PAP	S.X.	H.G.	Please select
0.56	74.4	Zm.3044.1.S1_at	AW360661	-	-	2e-10	At1g27900	RNA helicase, putative	S.X.	H.G.	Please select
0.53	69.1	Zm.526.1.S1_at	AF242320.1	hypothetical LOC541826	-	1e-3	At5g14620	DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2)	S.X.	H.G.	Please select
0.44	55.7	Zm.16513.1.A1_at	CF634462	hypothetical protein LOC100273404	-	0	At5g09810	ACT7 (ACTIN 7)	S.X.	H.G.	Please select
0.33	36.0	Zm.3044.2.S1_a_at	AI881563	-	-	8e-1	At1g59835	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
17.7	99.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.1	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.5	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1	98.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.2	98.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.1	98.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.1	98.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM202290	Mo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.6	97.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.40	0	646	Zm.14368.1.A1_at	CA404488	-	-	7e+0	At4g01670	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.9504.1.A1_at	BM269407	-	-	4e-7	At1g73570	suppressor of lin-12-like protein-related / sel-1 protein-related	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.5206.2.S1_a_at	CD978008	hexokinase	-	4e-3	At4g29130	HXK1 (HEXOKINASE 1)	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.5206.1.S1_x_at	AY125979.1	hexokinase	-	4e-3	At4g29130	HXK1 (HEXOKINASE 1)	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.16984.1.S1_at	CD441220	hypothetical protein LOC100216599	-	2e-111	At2g05710	aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.13828.1.S1_at	AY104425.1	-	-	5e-5	At1g30040	ATGA2OX2 (GIBBERELLIN 2-OXIDASE)	C.G.	S.X.	Please select
0.01	7e+0	32	Zm.9561.1.A1_at	AW433482	calmodulin binding protein	-	7e-7	At5g57580	calmodulin-binding protein	C.G.	S.X.	Please select
0.01	7e+0	32	Zm.8049.1.S1_at	CF009485	hypothetical protein LOC100272989	-	3e-3	At4g05330	AGD13 (ARF-GAP domain 13)	C.G.	S.X.	Please select
0.01	7e+0	32	Zm.6916.1.S1_at	AW067358	hypothetical protein LOC100273981	-	9e-13	At5g66750	CHR1 (CHROMATIN REMODELING 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.21	4e-34	147	Arabidopsis thaliana	At1g70300	843366	KUP6	potassium transporter	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	6e-6	54	Glycine max	GmaAffx.69322.2.S1_at	BI470205	-	-	8e-14	At5g14880	potassium transporter, putative	C.G.	S.X.	Please select
0.15	2e-65	250	Hordeum vulgare	Contig14687_at	Contig14687	-	-	3e-1	At5g19980	integral membrane family protein	C.G.	S.X.	Please select
0.52	0	1146	Oryza sativa	Os02g0730300	AK111629.1	-	Potassium transporter 8 (AtPOT8) (AtHAK8)	3e-26	At1g70300	KUP6	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.10	2e-12	75	Populus trichocarpa	PtpAffx.39091.1.S1_at	CF231045	hypothetical protein	-	2e-20	At1g70300	KUP6	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.35	9e-131	468	Triticum aestivum	TaAffx.23645.1.S1_at	CA732401	-	-	5e-12	At1g70300	KUP6	C.G.	S.X.	Please select
0.01	1e+0	34	Vitis vinifera	1619055_at	CD717990	-	-	1e-16	At3g43240	ARID/BRIGHT DNA-binding domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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