CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.6218.1.A1_at

Gene name developmentally-regulated GTP-binding protein 1

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.6218.1.A1_at AI677344 developmentally-regulated GTP-binding protein 1 - 4e-58 At4g39520 GTP-binding protein, putative S.X. H.G.
0.77 92.1 Zm.6217.1.A1_at BE129797 plant-specific domain TIGR01589 family protein - 7e-1 At1g28600 lipase, putative S.X. H.G.
0.55 71.6 Zm.4825.1.A1_at AI978181 hypothetical protein LOC100272679 - 1e-1 At1g42480 unknown protein S.X. H.G.
0.44 55.7 Zm.10852.1.A1_at BM078475 - - 5e-1 At2g35240 plastid developmental protein DAG, putative S.X. H.G.
0.36 41.3 Zm.6905.1.A1_a_at AF461814.1 histone1a - 6e-1 At4g04620 ATG8B (autophagy 8b) S.X. H.G.
0.23 18.6 Zm.530.1.S1_at AF297046.1 homocysteine S-methyltransferase-3 - 2e-10 At3g25900 HMT-1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.2 96.0 GSM206326 Upper pulvinus 15 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.1 95.9 GSM206332 Lower pulvinus 15 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.1 95.9 GSM206316 Upper pulvinus 60 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.7 95.4 GSM206325 Upper pulvinus 5 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.6 95.2 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.4 94.9 GSM206313 Upper pulvinus 5 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.4 94.9 GSM205365 Mo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.3 94.7 GSM206330 Lower pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.3 94.7 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2 94.5 GSM205371 Mo17xB73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e+0 34 Zm.10220.1.A1_at CF048859 - - 4e-1 At5g66815 unknown protein C.G. S.X.
0.02 6e+0 32 ZmAffx.1415.1.S1_at 40794996-90 - - 4e-2 At2g25312 - C.G. S.X.
0.01 6e+0 32 Zm.4416.1.S1_at AY536525.1 phospholipase C - 5e-3 At5g58700 phosphoinositide-specific phospholipase C family protein C.G. S.X.
0.01 6e+0 32 Zm.4392.2.A1_a_at AW787551 Ran-related GTP binding protein - 3e-63 At5g20020 RAN2 C.G. S.X.
0.01 6e+0 32 Zm.4392.2.A1_x_at AW787551 Ran-related GTP binding protein - 3e-63 At5g20020 RAN2 C.G. S.X.
0.01 6e+0 32 Zm.4037.1.A1_at X67561.1 Zmhox1a homeobox protein - 3e-5 At3g19510 HAT3.1 C.G. S.X.
0.01 6e+0 32 Zm.3858.1.A1_at AW065813 - - 6e-7 At3g56210 binding C.G. S.X.
0.01 6e+0 32 Zm.3927.1.A1_at BM350041 hypothetical protein LOC100193737 - 1e-8 At2g26670 TED4 (REVERSAL OF THE DET PHENOTYPE 4) C.G. S.X.
0.01 6e+0 32 Zm.3495.1.A1_at AI977881 hypothetical protein LOC100275858 - 5e+0 At1g21327 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.48 4e-58 226 Arabidopsis thaliana At4g39520 830106 GTP-binding protein, putative F:GTP binding;P:unknown;C:intracellular;BOMAFP - - - C.G. S.X.
0.21 7e-30 133 Glycine max Gma.4107.1.S1_at BI971397 - - 2e-62 At4g39520 GTP-binding protein, putative C.G. S.X.
0.57 0 735 Hordeum vulgare Contig5976_s_at Contig5976 - - 4e-58 At4g39520 GTP-binding protein, putative C.G. S.X.
0.61 0 787 Oryza sativa Os07g0627800 AK066361.1 - Developmentally regulated GTP-binding protein 1(DRG 1) 2e-53 At4g39520 GTP-binding protein, putative C.G. S.X.
0.29 2e-20 101 Populus trichocarpa PtpAffx.7308.1.S1_a_at BP934464 hypothetical protein - 1e-57 At4g39520 GTP-binding protein, putative C.G. S.X.
0.50 2e-121 436 Triticum aestivum Ta.7400.1.S1_at BT009459.1 - - 4e-21 At4g39520 GTP-binding protein, putative C.G. S.X.
0.26 5e-24 111 Vitis vinifera 1615474_at CB978861 - - 8e-49 At4g39520 GTP-binding protein, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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