Gene omics information

Query gene ID Zm.6196.2.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.6196.2.S1_atAI677134--3e+0At5g26880tRNA/rRNA methyltransferase (SpoU) family proteinS.X.H.G.
0.6785.8Zm.3780.1.S1_atAW438304low-molecular-weight cysteine-rich protein LCR69-9e-2At1g47317-S.X.H.G.
0.5065.7Zm.13808.2.A1_a_atAI665043--4e-7At4g03240FH (FRATAXIN HOMOLOG)S.X.H.G.
0.5065.7Zm.4845.1.S1_x_atCD442886alcohol dehydrogenase1 /// syntaxin-related protein KNOLLE-4e-5At4g03330SYP123 (SYNTAXIN OF PLANTS 123)S.X.H.G.
0.4251.3Zm.17701.1.S1_atCK370965hypothetical protein LOC100278172-4e-1At4g19400actin bindingS.X.H.G.
0.3131.6Zm.9411.1.S1_atCA827391SNF1-related protein kinase regulatory subunit beta-2-4e-1At4g26150CGA1 (CYTOKININ-RESPONSIVE GATA FACTOR 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
36.199.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.799.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.599.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.299.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.099.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.899.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.799.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.999.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.599.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.296.0GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.286e-120428Zm.6196.1.A1_a_atBG265419hypothetical protein LOC100279988-7e-1At4g35880aspartyl protease family proteinC.G.S.X.
0.031e+032Zm.9576.1.A1_atCD999634iron-sulfur assembly protein IscA-3e-4At1g10500ATCPISCA (chloroplast-localized IscA-like protein)C.G.S.X.
0.011e+032Zm.526.1.S1_atAF242320.1hypothetical LOC541826-1e-3At5g14620DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2)C.G.S.X.
0.011e+032Zm.4286.1.A1_atAY103792.1hypothetical protein LOC100274092-2e-17At5g66680DGL1C.G.S.X.
0.031e+032Zm.15379.1.A1_atBG842487--5e+0At2g30424TCL2 (TRICHOMELESS 2)C.G.S.X.
0.045e+030ZmAffx.1142.1.S1_atAW399873--2e+0At5g47550cysteine protease inhibitor, putative / cystatin, putativeC.G.S.X.
0.045e+030ZmAffx.1142.1.A1_atAW399873--2e+0At5g47550cysteine protease inhibitor, putative / cystatin, putativeC.G.S.X.
0.015e+030Zm.7727.1.S1_s_atCK986121polyubiquitin containing 7 ubiquitin monomers /// ubiquitin /// polyubiquitin-5e-129At5g20620UBQ4C.G.S.X.
0.015e+030Zm.476.1.S1_atAF003551.2lysine-ketoglutarate reductase/saccharopine dehydr-3e-8At4g33150lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzymeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e+032Arabidopsis thalianaAt5g26880832746tRNA/rRNA methyltransferase (SpoU) family proteinF:RNA binding, RNA methyltransferase activity;P:RNA processing;C:unknown;BOPM---C.G.S.X.
0.054e-342Glycine maxGma.11023.2.S1_a_atAW278528--2e-1At2g17760aspartyl protease family proteinC.G.S.X.
0.054e-134Hordeum vulgareHV_CEb0009O04r2_atHV_CEb0009O04r2--1e+0At2g25890glycine-rich protein / oleosinC.G.S.X.
0.127e-52204Oryza sativaOs.6166.1.S1_at---0C.G.S.X.
0.044e+032Populus trichocarpaPtpAffx.69611.1.A1_atCV250831hypothetical protein-6e-23At2g4346060S ribosomal protein L38 (RPL38A)C.G.S.X.
0.231e-24113Triticum aestivumTa.8301.1.A1_atBQ161713--5e+0At3g25014unknown proteinC.G.S.X.
0.044e+030Vitis vinifera1616471_atCF369074--3e+0At1g50290unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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