CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.6147.2.S1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.59 76.1 Zm.6147.2.S1_at CD942228 - - 4e-24 At3g51800 ATG2 S.X. H.G.
0.60 77.8 Zm.13456.2.A1_at AY111230.1 Hypothetical protein LOC100194201 - 5e+0 At3g50520 phosphoglycerate/bisphosphoglycerate mutase family protein S.X. H.G.
0.53 69.1 Zm.1737.2.A1_a_at AW355997 - - 8e-1 At1g15140 oxidoreductase NAD-binding domain-containing protein S.X. H.G.
0.50 65.7 Zm.17625.1.A1_at CF631845 - - 4e-23 At1g10200 WLIM1 S.X. H.G.
0.44 55.7 Zm.5245.1.A1_at CF003837 - - 7e+0 At5g66607 unknown protein S.X. H.G.
0.32 33.4 Zm.18012.1.A1_at CK827313 - - 2e-3 At5g48950 thioesterase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.5 97.1 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.2 96.9 GSM205371 Mo17xB73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.0 96.7 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.8 96.6 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.6 96.4 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.6 96.4 GSM205374 B73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.9 95.7 GSM205366 B73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.7 95.4 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.7 95.4 GSM205365 Mo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.5 95.1 GSM205372 B73xMo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.74 0 1626 Zm.6147.1.A1_x_at CK985534 proliferation-associated protein 2G4 - 7e-26 At3g51800 ATG2 C.G. S.X.
0.36 1e-77 289 Zm.6147.3.A1_at CN070879 - - 2e-5 At3g51800 ATG2 C.G. S.X.
0.19 1e-77 289 Zm.6147.3.S1_at CN070879 - - 2e-5 At3g51800 ATG2 C.G. S.X.
0.36 1e-77 289 Zm.6147.3.A1_x_at CN070879 proliferation-associated protein 2G4 - 2e-5 At3g51800 ATG2 C.G. S.X.
0.11 1e-22 107 Zm.18949.1.A1_at CO533095 hypothetical protein LOC100280231 - 4e-2 At4g37550 formamidase, putative / formamide amidohydrolase, putative C.G. S.X.
0.01 9e-2 38 Zm.17509.1.S1_s_at CK394687 low temperature viability protein - 2e-1 At5g11930 glutaredoxin family protein C.G. S.X.
0.01 9e-2 38 Zm.17509.1.S1_at CK394687 low temperature viability protein - 2e-1 At5g11930 glutaredoxin family protein C.G. S.X.
0.01 1e+0 34 Zm.6542.1.A1_at BG518200 - - 4e-6 At4g20850 TPP2 (TRIPEPTIDYL PEPTIDASE II) C.G. S.X.
0.01 1e+0 34 Zm.1907.1.S1_at AW498080 - - 1e+0 At2g29410 MTPB1 (METAL TOLERANCE PROTEIN B1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 4e-24 113 Arabidopsis thaliana At3g51800 824343 ATG2 putative nuclear DNA-binding protein G2p (AtG2) mRNA, - - - C.G. S.X.
0.46 3e-81 303 Glycine max Gma.10491.1.S1_at CD391381 - - 5e-48 At3g51800 ATG2 C.G. S.X.
0.61 0 1033 Hordeum vulgare Contig3176_at Contig3176 - - 1e-18 At3g51800 ATG2 C.G. S.X.
0.61 0 1027 Oryza sativa Os05g0350500 AK102897.1 - Peptidase M24 family protein 2e-17 At3g51800 ATG2 C.G. S.X.
0.31 1e-58 228 Populus trichocarpa Ptp.2590.1.A1_at CV230651 hypothetical protein - 2e-34 At3g51800 ATG2 C.G. S.X.
0.47 2e-162 573 Triticum aestivum Ta.28356.1.S1_at BJ275200 - - 2e-14 At3g51800 ATG2 C.G. S.X.
0.33 3e-59 228 Vitis vinifera 1621637_at BQ794462 hypothetical protein LOC100266121 - 3e-36 At3g51800 ATG2 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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