Gene omics information

Query gene ID	Zm.607.1.A1_at
Gene name	plasma membrane integral protein ZmPIP2-6
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	94.0	Zm.607.1.A1_at	AF326495.1	plasma membrane integral protein ZmPIP2-6	-	2e-25	At2g37170	PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)	S.X.	H.G.	Please select
0.67	85.8	Zm.13188.2.S1_x_at	CF011864	hypothetical protein LOC100193240	-	1e-51	At3g11940	ATRPS5A (RIBOSOMAL PROTEIN 5A)	S.X.	H.G.	Please select
0.60	77.8	Zm.12033.1.A1_at	BM382797	cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase	-	8e-1	At3g59840	unknown protein	S.X.	H.G.	Please select
0.57	75.1	Zm.1177.1.S1_at	AY105040.1	hypothetical protein LOC100274218	-	3e-112	At5g03340	cell division cycle protein 48, putative / CDC48, putative	S.X.	H.G.	Please select
0.36	41.3	Zm.2514.1.A1_at	CO524312	hypothetical protein LOC100273294	-	1e-8	At4g21450	vesicle-associated membrane family protein / VAMP family protein	S.X.	H.G.	Please select
0.15	8.6	Zm.15439.1.A1_at	CD219438	-	-	3e-3	At2g31820	ankyrin repeat family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.2	98.6	GSM202409	Zmet2 study 11-day seedling aerial tissue genotype B73 zmet2-m1 Rep6	GSE8188	Expression profiling of zmet2-m1 mutants relative to wild-type
10.7	98.5	GSM253278	ZM_8d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
10.6	98.4	GSM202408	Zmet2 study 11-day seedling aerial tissue genotype B73 Rep6	GSE8188	Expression profiling of zmet2-m1 mutants relative to wild-type
10.2	98.4	GSM202404	Zmet2 study 11-day seedling aerial tissue genotype B73 Rep5	GSE8188	Expression profiling of zmet2-m1 mutants relative to wild-type
10.0	98.4	GSM202405	Zmet2 study 11-day seedling aerial tissue genotype B73 zmet2-m1 Rep5	GSE8188	Expression profiling of zmet2-m1 mutants relative to wild-type
8.7	98.1	GSM202278	B73 11-day seedling aerial tissue biological replicate 1	GSE8174	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
7.4	97.8	GSM253277	ZM_8d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
7.2	97.8	GSM202277	Mo17 11-day seedling aerial tissue biological replicate 1	GSE8174	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
6.3	97.4	GSM202412	Zmet2 study 11-day seedling aerial tissue genotype B73 zmet2-m1 Rep1	GSE8188	Expression profiling of zmet2-m1 mutants relative to wild-type
6.0	97.3	GSM202414	Zmet2 study 11-day seedling aerial tissue genotype B73 zmet2-m1 Rep3	GSE8188	Expression profiling of zmet2-m1 mutants relative to wild-type

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.49	0	702	Zm.600.1.S1_at	AY243802.1	plasma membrane intrinsic protein	-	9e-34	At2g37170	PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)	C.G.	S.X.	Please select
0.36	0	700	Zm.606.1.A2_s_at	AF326493.1	plasma membrane integral protein ZmPIP2-2 /// plasma membrane intrinsic protein2	-	1e-37	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	C.G.	S.X.	Please select
0.36	0	700	Zm.606.1.A1_at	AF326493.1	plasma membrane intrinsic protein2	-	1e-37	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	C.G.	S.X.	Please select
0.52	0	656	Zm.15890.1.A1_at	AF326494.1	plasma membrane intrinsic protein2	-	9e-28	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	C.G.	S.X.	Please select
0.46	9e-131	466	Zm.14436.1.A1_at	AF326491.1	plasma membrane integral protein ZmPIP2-1	-	1e-30	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	C.G.	S.X.	Please select
0.39	1e-108	393	Zm.605.1.S1_a_at	AF326492.1	plasma membrane integral protein ZmPIP2-2	-	4e-27	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	C.G.	S.X.	Please select
0.30	1e-43	176	Zm.334.1.S1_at	AF326489.1	plasma membrane intrinsic protein1	-	5e-11	At1g01620	PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)	C.G.	S.X.	Please select
0.32	2e-39	163	Zm.604.1.A1_at	AF326490.1	plasma membrane integral protein ZmPIP1-6	-	1e-5	At1g01620	PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)	C.G.	S.X.	Please select
0.26	4e-31	135	Zm.181.1.A1_at	AY243800.1	transmembrane protein	-	3e-12	At1g01620	PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.33	2e-25	117	Arabidopsis thaliana	At2g37170	818293	PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)	a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf dev	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.22	7e-14	79	Glycine max	Gma.11116.4.S1_s_at	CD408430	-	-	4e-39	At4g35100	PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3)	C.G.	S.X.	Please select
0.49	4e-139	494	Hordeum vulgare	Contig1223_at	Contig1223	aquaporin	-	6e-38	At2g37170	PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)	C.G.	S.X.	Please select
0.73	0	714	Oryza sativa	Os07g0448100	NM_187082.1	-	Plasma membrane integral protein ZmPIP2-6	9e-30	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.20	1e-24	115	Populus trichocarpa	PtpAffx.7681.1.A1_at	CV271115	-	-	7e-38	At2g37170	PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.45	5e-122	438	Triticum aestivum	Ta.28728.2.S1_x_at	BJ283978	-	-	1e-39	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	C.G.	S.X.	Please select
0.23	4e-27	121	Vitis vinifera	1614916_at	CB975077	aquaporin PIP2	-	2e-27	At3g54820	PIP2	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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