Gene omics information

Query gene ID	Zm.6049.3.A1_a_at
Gene name	phosphatidylinositol transporter/ transporter
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	85.8	Zm.6049.3.A1_a_at	AI734480	phosphatidylinositol transporter/ transporter	-	3e-3	At1g76640	calmodulin-related protein, putative	S.X.	H.G.	Please select
0.73	89.9	Zm.6049.1.A1_at	AY103705.1	-	-	1e-1	At5g02400	PLL2	S.X.	H.G.	Please select
0.67	85.8	Zm.17497.1.A1_at	BG266429	hypothetical protein LOC100273930	-	3e+0	Atmg00140	-	S.X.	H.G.	Please select
0.61	79.5	Zm.749.1.S1_at	AY291061.1	photosystem II subunit PsbS1	-	8e-7	At1g44575	NPQ4 (NONPHOTOCHEMICAL QUENCHING)	S.X.	H.G.	Please select
0.47	59.9	Zm.6146.1.A1_at	CD989568	brassinosteroid biosynthesis-like protein	-	1e-40	At3g19820	DWF1 (DWARF 1)	S.X.	H.G.	Please select
0.40	48.5	Zm.18446.1.A1_at	CO518758	-	-	3e-2	At1g29800	phosphoinositide binding / zinc ion binding	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
28.1	99.7	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
25.6	99.6	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
18.0	99.2	GSM202306	Mo17xB73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
16.2	99.0	GSM202290	Mo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
15.2	98.9	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
13.7	98.8	GSM202302	B73xMo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
13.6	98.8	GSM202307	B73xMo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
13.5	98.8	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
11.4	98.5	GSM162266	Wild type 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
11.4	98.5	GSM202295	Mo17xB73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	9e-2	36	Zm.5776.1.A1_at	CO520963	hypothetical protein LOC100273913	-	9e-2	At2g47140	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please select
0.03	9e-2	36	Zm.14524.1.A1_at	AY104558.1	R2R3MYB-domain protein	-	8e-3	At4g38620	MYB4	C.G.	S.X.	Please select
0.03	9e-2	36	Zm.14524.1.S1_at	AY104558.1	hypothetical protein LOC100272454	-	8e-3	At4g38620	MYB4	C.G.	S.X.	Please select
0.02	9e-2	36	Zm.13865.1.S1_at	AF521880.1	R2R3 Myb transcription factor MYB-IF35	-	1e-5	At5g61420	MYB28 (myb domain protein 28)	C.G.	S.X.	Please select
0.02	3e-1	34	Zm.4169.1.A1_at	AY106935.1	hypothetical protein LOC100217197	-	6e-4	At4g36290	ATP-binding region, ATPase-like domain-containing protein	C.G.	S.X.	Please select
0.02	3e-1	34	Zm.14601.1.A1_at	CB331155	-	-	2e+0	At4g35987	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	Zm.9998.1.A1_at	BM335619	-	-	3e-1	At5g57010	calmodulin-binding family protein	C.G.	S.X.	Please select
0.01	1e+0	32	Zm.6559.1.A1_at	CF051688	-	-	3e-14	At5g26830	threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)	C.G.	S.X.	Please select
0.02	1e+0	32	Zm.3615.1.A1_at	AW330686	hypothetical protein LOC100191498	-	3e-9	At1g73670	ATMPK15	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	3e-3	42	Arabidopsis thaliana	At1g76640	843997	calmodulin-related protein, putative	F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOBV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.76886.1.S1_at	BE024029	-	-	2e-2	At1g27595	-	C.G.	S.X.	Please select
0.05	6e+0	30	Hordeum vulgare	HVSMEk0009F22r2_s_at	HVSMEk0009F22r2	-	-	7e+0	At5g47229	unknown protein	C.G.	S.X.	Please select
0.05	2e+0	34	Oryza sativa	OsAffx.5006.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	4e+0	32	Populus trichocarpa	PtpAffx.213177.1.S1_s_at	pmrna25777	hypothetical protein	-	9e-1	At5g57760	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	3e+0	32	Triticum aestivum	TaAffx.7270.1.S1_at	CA663505	-	-	1e-2	At4g09180	basic helix-loop-helix (bHLH) family protein	C.G.	S.X.	Please select
0.06	6e-2	36	Vitis vinifera	1621471_s_at	AB073015.1	Myb transcription factor	-	1e-6	At3g13540	ATMYB5 (MYB DOMAIN PROTEIN 5)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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