Gene omics information

Query gene ID	Zm.6045.4.S1_at
Gene name	hypothetical protein LOC100191419
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	95.6	Zm.6045.4.S1_at	AY105966.1	hypothetical protein LOC100191419	-	5e-4	At1g51200	zinc finger (AN1-like) family protein	S.X.	H.G.	Please select
0.47	59.9	Zm.8901.1.A1_at	AY107832.1	hypothetical protein LOC100192580	-	9e-3	At3g11400	eukaryotic translation initiation factor 3G / eIF3g	S.X.	H.G.	Please select
0.40	48.5	Zm.1942.1.A1_at	CF014864	-	-	7e-57	At5g49460	ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2)	S.X.	H.G.	Please select
0.26	22.7	ZmAffx.720.1.S1_at	AI739909	-	-	2e-1	At1g11572	-	S.X.	H.G.	Please select
0.16	9.4	Zm.19049.1.A1_at	BG267149	hypothetical protein LOC100274230	-	4e-5	At4g31550	WRKY11	S.X.	H.G.	Please select
0.10	4.6	Zm.14293.1.S1_at	AY107455.1	hypothetical protein LOC100191275	-	9e+0	At5g06710	HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.1	94.3	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis
3.1	94.3	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
3.1	94.3	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
2.2	91.3	GSM206295	Lower pulvinus 5 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.1	90.8	GSM206290	Upper pulvinus 15 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.1	90.8	GSM206294	Lower pulvinus 2 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.0	90.2	GSM206297	Lower pulvinus 30 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.0	90.2	GSM206303	Upper pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.0	90.2	GSM206306	Lower pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
1.9	89.6	GSM206302	Upper pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.76	0	771	Zm.6045.3.S1_at	CO525120	AN14	-	2e-13	At1g51200	zinc finger (AN1-like) family protein	C.G.	S.X.	Please select
0.09	3e-47	188	Zm.17836.1.A1_at	CK370651	60S ribosomal protein L31	-	4e-22	At5g56710	60S ribosomal protein L31 (RPL31C)	C.G.	S.X.	Please select
0.09	3e-47	188	Zm.17836.1.A1_x_at	CK370651	60S ribosomal protein L31	-	4e-22	At5g56710	60S ribosomal protein L31 (RPL31C)	C.G.	S.X.	Please select
0.28	3e-47	188	Zm.14451.1.A1_at	CK827403	hypothetical LOC542155	-	4e-2	At1g51200	zinc finger (AN1-like) family protein	C.G.	S.X.	Please select
0.03	2e-1	36	ZmAffx.790.1.A1_at	AI759115	-	-	7e+0	At5g35405	-	C.G.	S.X.	Please select
0.03	2e-1	36	ZmAffx.790.1.S1_at	AI759115	-	-	7e+0	At5g35405	-	C.G.	S.X.	Please select
0.01	2e-1	36	Zm.958.1.S1_at	AY109128.1	hypothetical protein LOC100279983	-	6e-8	At5g02150	binding	C.G.	S.X.	Please select
0.01	2e-1	36	Zm.8053.1.A1_at	AY106785.1	hypothetical protein LOC100273786 /// xaa-Pro aminopeptidase 1	-	6e-14	At4g36760	ATAPP1	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.7900.1.A1_at	AY108078.1	-	-	1e-7	At5g51070	ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	5e-4	46	Arabidopsis thaliana	At1g51200	841543	zinc finger (AN1-like) family protein	F:DNA binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.08	8e-4	46	Glycine max	GmaAffx.92596.1.S1_s_at	CF808321	-	-	9e-8	At1g51200	zinc finger (AN1-like) family protein	C.G.	S.X.	Please select
0.41	3e-62	238	Hordeum vulgare	Contig1442_at	Contig1442	-	-	5e-4	At1g51200	zinc finger (AN1-like) family protein	C.G.	S.X.	Please select
0.42	2e-70	268	Oryza sativa	Os.12188.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.13	1e-27	125	Populus trichocarpa	PtpAffx.48763.2.S1_a_at	CV230971	hypothetical protein	-	3e-11	At1g51200	zinc finger (AN1-like) family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.64	4e-153	541	Triticum aestivum	Ta.12861.1.A1_at	CA484249	-	-	3e-1	At1g51200	zinc finger (AN1-like) family protein	C.G.	S.X.	Please select
0.12	4e-5	48	Vitis vinifera	1615672_at	BQ800515	hypothetical protein LOC100267237	-	2e-7	At1g51200	zinc finger (AN1-like) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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