CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.6026.1.S1_at

Gene name hypothetical protein LOC100194158

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 85.8 Zm.6026.1.S1_at CA405322 hypothetical protein LOC100194158 - 7e-21 At3g07100 protein transport protein Sec24, putative S.X. H.G.
0.60 77.8 Zm.1090.4.A1_at BQ547886 - - 2e+0 At4g17585 unknown protein S.X. H.G.
0.36 41.3 Zm.17525.1.S1_at AY639018.1 sucrose transport protein 4 - 3e-13 At1g09960 SUT4 (SUCROSE TRANSPORTER 4) S.X. H.G.
0.11 5.3 Zm.4131.1.A1_at AI855072 - - 1e+0 At4g20325 unknown protein S.X. H.G.
0.11 5.3 Zm.13322.1.A1_at BM895136 - - 1e+0 At1g52855 unknown protein S.X. H.G.
0.07 2.9 Zm.4402.1.A1_at AW091394 hypothetical protein LOC100193028 - 1e-3 At5g21160 La domain-containing protein / proline-rich family protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.6 96.4 GSM206326 Upper pulvinus 15 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.6 96.4 GSM206305 Right pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.5 96.3 GSM206325 Upper pulvinus 5 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.1 95.9 GSM206332 Lower pulvinus 15 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.1 95.9 GSM206307 Lower pulvinus 5 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.9 95.7 GSM206309 Lower pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.8 95.5 GSM206328 Upper pulvinus 60 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.6 95.2 GSM206330 Lower pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.6 95.2 GSM206310 Lower pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.5 95.1 GSM206299 Left pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.32 8e-105 381 Zm.5056.1.A1_at CA400979 - - 6e+0 At5g08400 unknown protein C.G. S.X.
0.01 2e+0 34 Zm.9934.1.A1_at BM332751 - - 2e+0 At5g59740 UDP-galactose/UDP-glucose transporter-related C.G. S.X.
0.01 2e+0 34 Zm.7867.2.S1_a_at BM080222 hypothetical protein LOC100192493 - 1e+0 At2g45650 AGL6 (AGAMOUS-LIKE 6) C.G. S.X.
0.01 2e+0 34 Zm.4682.1.S1_at AI737946 acyl-desaturase - 1e-1 At5g16230 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative C.G. S.X.
0.01 2e+0 34 Zm.12087.1.A1_at BU049902 hypothetical protein LOC100191989 - 1e-1 At3g26400 EIF4B1 C.G. S.X.
0.01 2e+0 34 Zm.10753.1.A1_at BQ539394 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 - 2e-2 At3g15890 protein kinase family protein C.G. S.X.
0.01 9e+0 32 Zm.7914.1.A1_at AY103800.1 hypothetical protein LOC100277669 - 5e-11 At3g21175 ZML1 (ZIM-LIKE 1) C.G. S.X.
0.01 9e+0 32 Zm.7914.1.A1_a_at AY103800.1 hypothetical protein LOC100277669 - 5e-11 At3g21175 ZML1 (ZIM-LIKE 1) C.G. S.X.
0.01 9e+0 32 Zm.4801.1.A1_at CB380793 hypothetical protein LOC100276618 - 2e+0 At1g17285 unknown protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 7e-21 103 Arabidopsis thaliana At3g07100 819896 protein transport protein Sec24, putative F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFBOPVA - - - C.G. S.X.
0.04 3e-2 42 Glycine max GmaAffx.76737.1.S1_at BF324681 - - 4e-36 At3g07100 protein transport protein Sec24, putative C.G. S.X.
0.69 0 1588 Hordeum vulgare Contig4175_at Contig4175 - - 1e-19 At3g07100 protein transport protein Sec24, putative C.G. S.X.
0.57 0 1546 Oryza sativa Os04g0129500 AK071986.1 - Sec23/Sec24 zinc finger domain containing protein 7e-31 At3g07100 protein transport protein Sec24, putative C.G. S.X.
0.13 8e-6 54 Populus trichocarpa PtpAffx.207677.1.S1_s_at pmrna15246 hypothetical protein - 2e-73 At3g07100 protein transport protein Sec24, putative C.G. S.X.
0.56 0 843 Triticum aestivum TaAffx.6598.1.S1_at CD938071 - - 1e-19 At3g07100 protein transport protein Sec24, putative C.G. S.X.
0.01 2e+0 34 Vitis vinifera 1620429_at AY427141.1 - - 1e-9 At5g63710 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage