Gene omics information

Query gene ID Zm.6025.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.6025.1.A1_atAI665242--3e+0At4g02830unknown proteinS.X.H.G.
0.8395.6Zm.6027.1.A1_atCF036358hypothetical protein LOC100275601-2e-10At2g33570unknown proteinS.X.H.G.
0.8094.0Zm.12502.1.S1_atCF349170--7e-83At4g11380beta-adaptin, putativeS.X.H.G.
0.7792.1Zm.6024.1.A1_atAW066865--2e+0At5g18500protein kinase family proteinS.X.H.G.
0.6785.8Zm.16021.1.S1_atCD995560low-molecular-weight cysteine-rich protein LCR68-1e+0At1g60300apical meristem formation protein-relatedS.X.H.G.
0.4759.9Zm.2157.3.A1_atCO521685--3e+0At3g01700AGP11S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
24.399.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.199.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.498.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.998.7GSM205376B73xMo17 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
11.798.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.398.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.098.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.398.4GSM205425B73 19 DAP endosperm tissue biological replicate 2GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
9.598.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.598.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e+032Zm.2613.1.A1_atAF283564.2sucrose-phosphatase1-4e-15At2g35840sucrose-phosphatase 1 (SPP1)C.G.S.X.
0.021e+032Zm.10454.1.S1_atBQ485901hypothetical protein LOC100216786-8e+0At4g00280-C.G.S.X.
0.035e+030Zm.9174.1.A1_atCD998621hypothetical protein LOC100194027-1e+0At5g06710HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA)C.G.S.X.
0.015e+030Zm.815.1.S1_atCF626555ethylene response element binding protein-6e-8At3g14230RAP2.2C.G.S.X.
0.015e+030Zm.721.1.A1_atBM267834Salt-inducible putative protein serine/threonine/tyrosine kinase-1e-33At1g06700serine/threonine protein kinase, putativeC.G.S.X.
0.025e+030Zm.271.1.S1_atL44133.1rough sheath1-4e-15At4g08150KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA)C.G.S.X.
0.015e+030Zm.19161.1.A1_atCF052905--2e-7At1g14650SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family proteinC.G.S.X.
0.015e+030Zm.19161.1.S1_atCF052905--2e-7At1g14650SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family proteinC.G.S.X.
0.025e+030Zm.15407.1.S1_atCK370528hypothetical protein LOC100217160-9e+0At5g14330unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e+032Arabidopsis thalianaAt4g02830828164unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.043e-136Glycine maxGmaAffx.34989.1.S1_atAW757005--3e+0At2g06025GCN5-related N-acetyltransferase (GNAT) family proteinC.G.S.X.
0.046e+030Hordeum vulgareContig6006_s_atContig6006--3e+0At1g60830U2 snRNP auxiliary factor large subunit, putativeC.G.S.X.
0.042e+034Oryza sativaOs02g0506600CB679096-Conserved hypothetical protein4e-1At5g59000zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.031e+034Populus trichocarpaPtpAffx.52176.2.S1_atBI127060hypothetical protein-1e-3At5g47240atnudt8 (Arabidopsis thaliana Nudix hydrolase homolog 8)C.G.S.X.
0.043e+032Triticum aestivumTaAffx.82148.1.S1_atCA676951--9e+0At4g30530defense-related protein, putativeC.G.S.X.
0.042e-134Vitis vinifera1622092_atCB002786hypothetical protein LOC100263099-3e+0At3g18800unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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