Gene omics information

Query gene ID Zm.5976.2.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4759.9Zm.5976.2.S1_atBG265782--3e+0At5g4008060S ribosomal protein-relatedS.X.H.G.
0.7389.9Zm.18446.1.A1_atCO518758--3e-2At1g29800phosphoinositide binding / zinc ion bindingS.X.H.G.
0.7389.9Zm.18416.1.A1_atCO524449hypothetical protein LOC100193203-3e-1At3g27900unknown proteinS.X.H.G.
0.6785.8Zm.3204.1.S1_x_atBM953397hypothetical protein LOC100278241-3e-1At1g70250receptor serine/threonine kinase, putativeS.X.H.G.
0.6785.8Zm.6569.9.A1_atAW09144740S ribosomal protein S15-6e-37At5g0951040S ribosomal protein S15 (RPS15D)S.X.H.G.
0.6077.8Zm.4805.1.A1_atCD441355heat shock protein 70 kDa-0At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)S.X.H.G.
0.5571.6Zm.8751.1.A1_atBM348137--1e+0At3g05700-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.999.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.399.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.299.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.199.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.299.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.799.2GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
16.699.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.597.8GSM205369Mo17 13 DAP endosperm tissue biological replicate 2GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
6.297.4GSM205365Mo17 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.997.3GSM205373Mo17 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.900682Zm.5976.2.S1_x_atBG265782--3e+0At5g4008060S ribosomal protein-relatedC.G.S.X.
0.312e-45180Zm.5976.1.S1_atAI673851hypothetical protein LOC100279511-4e-5At1g69370CM3 (chorismate mutase 3)C.G.S.X.
0.312e-45180Zm.5976.1.S1_a_atAI673851hypothetical protein LOC100279511 /// small nuclear ribonucleoprotein G-4e-5At1g69370CM3 (chorismate mutase 3)C.G.S.X.
0.022e-238Zm.4633.1.A1_atAI737444--3e+0At4g22740glycine-rich proteinC.G.S.X.
0.021e+032Zm.6706.1.A1_atCO517894hypothetical protein LOC100191263-6e-1At5g58490cinnamoyl-CoA reductase familyC.G.S.X.
0.011e+032Zm.523.1.S1_atAF200533.1cellulose synthase-9-3e-67At5g05170CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)C.G.S.X.
0.011e+032Zm.2724.1.S1_atBQ538519hypothetical protein LOC100193244-3e-13At3g22960PKP-ALPHAC.G.S.X.
0.015e+030Zm.648.1.S1_atAF144079.1S-adenosyl-L-methionine:L-methionine S-methyltransferase-6e-19At5g49810MMTC.G.S.X.
0.015e+030Zm.4311.1.S1_atAY105462.1--1e-31At1g29880glycyl-tRNA synthetase / glycine--tRNA ligaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e+032Arabidopsis thalianaAt5g4008083400560S ribosomal protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO---C.G.S.X.
0.041e+034Glycine maxGma.12904.1.A1_atBE823234--3e-9At4g26940galactosyltransferase family proteinC.G.S.X.
0.074e-1373Hordeum vulgareContig7705_atContig7705--1e-11At3g29200CM1 (CHORISMATE MUTASE 1)C.G.S.X.
0.083e-1479Oryza sativaOs01g0764400AK068983.1-Chorismate mutase, chloroplast precursor (EC5.4.99.5) (CM-1)2e+0At5g10870ATCM2 (chorismate mutase 2)C.G.S.X.
0.054e+032Populus trichocarpaPtpAffx.210651.1.S1_atpmrna20891hypothetical protein-2e+0At3g51632CPuORF44 (Conserved peptide upstream open reading frame 44)C.G.S.X.
0.064e-961Triticum aestivumTa.5448.1.S1_atCA736403--3e-9At3g29200CM1 (CHORISMATE MUTASE 1)C.G.S.X.
0.072e-134Vitis vinifera1611895_atCF210985similar to putative chorismate mutase-7e-3At1g69370CM3 (chorismate mutase 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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