Gene omics information

Query gene ID	Zm.5898.1.A1_at
Gene name	hyoscyamine 6-dioxygenase
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.53	69.1	Zm.5898.1.A1_at	CF631996	hyoscyamine 6-dioxygenase	-	2e-1	At1g80610	unknown protein	S.X.	H.G.	Please select
0.80	94.0	ZmAffx.1182.1.S1_at	AW927764	saposin-like type B, region 1 family protein	-	8e-4	At3g51730	saposin B domain-containing protein	S.X.	H.G.	Please select
0.75	90.8	Zm.13490.1.A1_at	CD997217	-	-	4e-8	At3g54670	TTN8 (TITAN8)	S.X.	H.G.	Please select
0.71	88.2	ZmAffx.501.1.A1_at	AI691747	-	-	8e-1	At5g62100	ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)	S.X.	H.G.	Please select
0.70	87.0	Zm.876.1.S1_at	BG316815	-	-	4e+0	At5g45740	unknown protein	S.X.	H.G.	Please select
0.63	81.1	ZmAffx.155.1.S1_at	AI668120	-	-	2e+0	At1g69600	ZFHD1 (ZINC FINGER HOMEODOMAIN 1)	S.X.	H.G.	Please select
0.53	69.1	Zm.12287.1.A1_at	CD568394	glucan endo-1,3-beta-glucosidase 3	-	4e-8	At1g18650	PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3)	S.X.	H.G.	Please select
0.41	49.7	Zm.6080.1.A1_a_at	AY106192.1	hypothetical protein LOC100276950	-	5e+0	At1g04778	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.1	98.2	GSM205431	Mo17 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
9.1	98.2	GSM205434	Mo17xB73 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
9.0	98.2	GSM205433	B73 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
8.0	98.0	GSM205436	B73xMo17 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.8	97.6	GSM205429	B73xMo17 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.8	97.6	GSM205425	B73 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
5.9	97.3	GSM205424	Mo17 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
5.5	97.1	GSM205427	Mo17xB73 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
5.4	97.0	GSM205421	B73 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
5.0	96.7	GSM205422	Mo17xB73 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.40	8e-42	171	Zm.10209.1.A1_at	CD444477	hypothetical protein LOC100191339	-	5e-2	At4g11700	unknown protein	C.G.	S.X.	Please select
0.04	1e-3	44	Zm.13828.1.S1_at	AY104425.1	-	-	5e-5	At1g30040	ATGA2OX2 (GIBBERELLIN 2-OXIDASE)	C.G.	S.X.	Please select
0.03	5e-3	42	Zm.15885.1.S1_at	U04434.1	flavanone 3-hydroxylase1	-	2e-10	At3g51240	F3H (FLAVANONE 3-HYDROXYLASE)	C.G.	S.X.	Please select
0.01	2e-2	40	Zm.13961.1.S1_at	AY540745.1	hydroperoxide lyase	-	4e+0	At2g05440	glycine-rich protein	C.G.	S.X.	Please select
0.02	8e-2	38	Zm.8121.1.A1_at	CF630483	hypothetical protein LOC100276169	-	3e-2	At1g63780	IMP4	C.G.	S.X.	Please select
0.02	8e-2	38	Zm.6748.2.A1_at	AY103965.1	60S ribosomal protein L26-1	-	5e-10	At3g49910	60S ribosomal protein L26 (RPL26A)	C.G.	S.X.	Please select
0.01	8e-2	38	Zm.5550.1.S1_at	AI622648	hypothetical protein LOC100280363	-	2e-7	At3g60600	VAP (VESICLE ASSOCIATED PROTEIN)	C.G.	S.X.	Please select
0.03	8e-2	38	Zm.3184.1.A1_at	AY105651.1	gibberellin 20-oxidase	-	5e-2	At5g07200	YAP169	C.G.	S.X.	Please select
0.02	3e-1	36	Zm.9691.1.A1_at	BM335746	-	-	4e+0	At4g15150	glycine-rich protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-1	38	Arabidopsis thaliana	At1g80610	844400	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e+0	36	Glycine max	PsAffx.CL1919Contig1_s_at	PsAffx.CL1919Contig1	-	-	5e+0	At2g30360	SIP4 (SOS3-INTERACTING PROTEIN 4)	C.G.	S.X.	Please select
0.49	3e-57	222	Hordeum vulgare	Contig11699_at	Contig11699	-	-	2e-3	At5g05600	oxidoreductase, 2OG-Fe(II) oxygenase family protein	C.G.	S.X.	Please select
0.39	6e-37	157	Oryza sativa	Os07g0169600	AK121818.1	-	2OG-Fe(II) oxygenase domain containing protein	2e-1	At2g35640	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	4e+0	34	Populus trichocarpa	PtpAffx.217491.1.S1_at	pmrna32776	-	-	4e+0	At1g12180	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.47	5e-48	192	Triticum aestivum	Ta.8640.1.S1_a_at	BQ807183	-	-	6e-1	At1g30040	ATGA2OX2 (GIBBERELLIN 2-OXIDASE)	C.G.	S.X.	Please select
0.02	2e-1	36	Vitis vinifera	1616441_at	CB343294	-	-	2e-1	At1g30070	SGS domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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