CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.5801.1.A1_at

Gene name hypothetical protein LOC100275802

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 77.8 Zm.5801.1.A1_at AY111239.1 hypothetical protein LOC100275802 - 6e-3 At5g12470 unknown protein S.X. H.G.
0.77 92.1 Zm.16065.2.A1_s_at BM080549 Histone H2B.3 - 8e-15 At1g07790 HTB1 S.X. H.G.
0.60 77.8 Zm.5146.2.S1_at AI586869 Hypothetical protein LOC100194286 - 6e-22 At1g02560 CLPP5 (NUCLEAR ENCODED CLP PROTEASE 5) S.X. H.G.
0.50 65.7 Zm.11652.1.A1_at BM379695 hypothetical protein LOC100194255 - 6e-3 At4g02690 glutamate binding S.X. H.G.
0.46 58.4 Zm.13558.1.A1_at BQ163517 - - 1e-3 At1g26340 CB5-A (CYTOCHROME B5 ISOFORM A) S.X. H.G.
0.21 15.5 Zm.3078.1.S1_at AW453293 hypothetical protein LOC100192566 - 2e+0 At4g28181 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.6 97.6 GSM253269 ZM_4.5d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
6.0 97.3 GSM253268 ZM_4.5d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
5.7 97.2 GSM253256 ZM_2d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
5.5 97.1 GSM253270 ZM_4.5d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
5.3 96.9 GSM253257 ZM_2d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
4.9 96.7 GSM253258 ZM_2d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
4.8 96.6 GSM253263 ZM_4d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
4.5 96.3 GSM253264 ZM_4d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.9 95.7 GSM253262 ZM_4d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.8 95.5 GSM253260 ZM_2d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 7e-10 63 Zm.12354.1.A1_at AY106780.1 hypothetical protein LOC100276525 - 3e-9 At5g12470 unknown protein C.G. S.X.
0.00 6e-1 34 Zm.264.1.S1_a_at AY312172.1 acetyl-coenzyme A carboxylase - 6e-42 At1g36180 ACC2 (ACETYL-COA CARBOXYLASE 2) C.G. S.X.
0.01 1e+1 30 Zm.859.1.A1_at CF060267 hypothetical protein LOC100191283 - 8e-1 At4g28420 aminotransferase, putative C.G. S.X.
0.02 1e+1 30 Zm.6276.1.A1_at AW191102 - - 1e+0 At4g23882 heavy-metal-associated domain-containing protein C.G. S.X.
0.02 1e+1 30 Zm.5329.1.A1_at AI619268 hypothetical protein LOC100280090 - 2e-5 At3g43790 ZIFL2 (ZINC INDUCED FACILITATOR-like 2) C.G. S.X.
0.02 1e+1 30 Zm.5306.1.A1_at AI600375 - - 2e-3 At5g05510 protein kinase-related C.G. S.X.
0.01 1e+1 30 Zm.396.1.A1_at U85494.1 LON peptidase1 - 1e-53 At5g47040 LON2 (LON PROTEASE 2) C.G. S.X.
0.01 1e+1 30 Zm.18526.1.S1_at CO522434 hypothetical protein LOC100272796 - 6e-17 At5g13100 unknown protein C.G. S.X.
0.01 1e+1 30 Zm.17197.1.A1_at CO531814 DNA binding protein - 3e-3 At3g51960 bZIP family transcription factor C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 6e-3 42 Arabidopsis thaliana At5g12470 831122 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope;PMBOVF - - - C.G. S.X.
0.03 8e+0 32 Glycine max GmaAffx.19826.1.A1_at BU549762 - - 4e+0 At5g45940 atnudt11 (Arabidopsis thaliana Nudix hydrolase homolog 11) C.G. S.X.
0.11 6e-23 107 Hordeum vulgare Contig8699_at Contig8699 - - 2e-10 At5g12470 unknown protein C.G. S.X.
0.25 2e-38 161 Oryza sativa Os01g0957200 AK073433.1 - Conserved hypothetical protein 9e-13 At5g12470 unknown protein C.G. S.X.
0.08 6e-10 65 Populus trichocarpa PtpAffx.200816.1.S1_at pmrna1597 hypothetical protein - 4e-92 At5g12470 unknown protein C.G. S.X.
0.26 5e-16 85 Triticum aestivum Ta.21178.1.S1_at CA501453 - - 3e-9 At5g12470 unknown protein C.G. S.X.
0.12 4e-4 44 Vitis vinifera 1615106_at BM437755 - - 2e-30 At5g12470 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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