CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.5770.2.S1_a_at

Gene name protein disulfide isomerase

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.97 99.9 Zm.5770.2.S1_a_at BG265985 protein disulfide isomerase - 4e+0 At3g05490 RALFL22 (ralf-like 22) S.X. H.G.
0.40 48.5 ZmAffx.989.1.A1_at AI834717 - - 3e+0 At4g35783 RTFL6 (ROTUNDIFOLIA LIKE 6) S.X. H.G.
0.39 45.6 ZmAffx.977.1.S1_at AI833949 - - 8e-1 At4g04630 unknown protein S.X. H.G.
0.36 41.3 Zm.9783.1.A1_at BM347856 - - 1e+0 At3g29200 CM1 (CHORISMATE MUTASE 1) S.X. H.G.
0.36 41.3 Zm.9477.1.A1_at BM269210 - - 7e-18 At1g03140 splicing factor Prp18 family protein S.X. H.G.
0.33 36.0 Zm.4852.2.A1_at AI770453 Hypothetical protein LOC100192969 - 3e+0 At3g16300 integral membrane family protein S.X. H.G.
0.33 36.0 Zm.19201.2.A1_at CO526388 Hypothetical protein LOC100216991 - 2e+0 At5g39650 unknown protein S.X. H.G.
0.30 29.8 Zm.7544.1.A1_at BM334017 mRNA - 3e-2 At3g20650 mRNA capping enzyme family protein S.X. H.G.
0.27 24.6 Zm.5097.1.A1_at BM379001 PAC - 9e-18 At2g48120 PAC (PALE CRESS) S.X. H.G.
0.25 21.3 Zm.3540.1.A1_at AW056006 - - 1e+1 At5g64250 2-nitropropane dioxygenase family / NPD family S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.9 97.7 GSM205374 B73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
6.5 97.5 GSM205366 B73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
6.1 97.4 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.4 97.0 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.2 96.0 GSM205371 Mo17xB73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.2 96.0 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.1 95.9 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.7 95.4 GSM205372 B73xMo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.4 94.9 GSM206297 Lower pulvinus 30 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.4 94.9 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 8e-151 531 Zm.5770.1.S1_at CD959897 protein disulfide isomerase - 8e-17 At3g20560 ATPDIL5-3 (PDI-LIKE 5-3) C.G. S.X.
0.01 2e+0 32 Zm.5481.2.A1_at AW017536 dek protein - 1e-3 At3g48710 - C.G. S.X.
0.01 2e+0 32 Zm.17832.1.S1_at AB112937.1 plastidic general dicarboxylate transporter - 7e-8 At5g64290 DIT2.1 (DICARBOXYLATE TRANSPORT 2.1) C.G. S.X.
0.03 7e+0 30 ZmAffx.243.1.A1_at AI670255 - - 2e-1 At1g66940 protein kinase-related C.G. S.X.
0.03 7e+0 30 ZmAffx.243.1.S1_at AI670255 - - 2e-1 At1g66940 protein kinase-related C.G. S.X.
0.02 7e+0 30 Zm.9231.1.A1_at BM267414 hypothetical protein LOC100274190 - 6e+0 At5g57420 IAA33 (INDOLE-3-ACETIC ACID INDUCIBLE 33) C.G. S.X.
0.01 7e+0 30 Zm.747.1.A1_at CF627612 hypothetical protein LOC100191588 - 3e-22 At1g16180 TMS membrane family protein / tumour differentially expressed (TDE) family protein C.G. S.X.
0.01 7e+0 30 Zm.6524.1.S1_at CF348845 hypothetical protein LOC100274031 - 3e-1 At5g40010 AATP1 (AAA-ATPase 1) C.G. S.X.
0.01 7e+0 30 Zm.263.1.A1_at U10270.1 G-box binding factor 1 - 5e-3 At2g35530 bZIP transcription factor family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e+0 32 Arabidopsis thaliana At3g05490 819714 RALFL22 (ralf-like 22) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. - - - C.G. S.X.
0.04 6e+0 32 Glycine max HgAffx.590.1.S1_at CK352100 - - 1e+1 At3g43480 - C.G. S.X.
0.25 8e-34 143 Hordeum vulgare Contig10867_at Contig10867 - - 9e-35 At3g20560 ATPDIL5-3 (PDI-LIKE 5-3) C.G. S.X.
0.18 4e-54 212 Oryza sativa Os.18158.1.S1_at - - - 0 C.G. S.X.
0.04 2e+0 34 Populus trichocarpa PtpAffx.214058.1.S1_at pmrna27371 hypothetical protein - 7e-1 At1g29110 cysteine proteinase, putative C.G. S.X.
0.21 7e-39 161 Triticum aestivum Ta.16789.1.S1_at CK207128 - - 2e-17 At4g27080 thioredoxin family protein C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1620005_at CK136937.1 - - 4e+0 At4g16805 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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