Gene omics information

Query gene ID	Zm.5768.1.A1_at
Gene name	hypothetical protein LOC100279614
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.84	95.8	Zm.5768.1.A1_at	AI649523	hypothetical protein LOC100279614	-	6e+0	At3g63050	unknown protein	S.X.	H.G.	Please select
0.88	96.7	Zm.5770.1.S1_at	CD959897	protein disulfide isomerase	-	8e-17	At3g20560	ATPDIL5-3 (PDI-LIKE 5-3)	S.X.	H.G.	Please select
0.35	38.9	Zm.7028.1.S1_at	CF016721	hypothetical protein LOC100278953	-	1e+0	At3g07230	wound-responsive protein-related	S.X.	H.G.	Please select
0.29	28.1	Zm.7495.1.A1_at	CF636496	hypothetical protein LOC100193062	-	5e-1	At2g13510	unknown protein	S.X.	H.G.	Please select
0.27	24.6	Zm.15495.3.A1_at	BQ294006	-	-	3e-28	At4g36690	ATU2AF65A	S.X.	H.G.	Please select
0.25	21.3	Zm.7178.1.S1_at	BI396376	-	-	4e+0	At2g29180	unknown protein	S.X.	H.G.	Please select
0.22	16.9	Zm.4711.1.S1_at	AY107508.1	-	-	1e+1	At5g54990	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.18	11.6	Zm.8876.1.A1_at	BM347295	gamma-interferon-inducible lysosomal thiol reductase	-	3e-2	At1g07080	gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein	S.X.	H.G.	Please select
0.16	9.4	Zm.7649.1.A1_at	CF044168	RNA-binding post-transcriptional regulator csx1	-	4e-15	At5g19350	RNA-binding protein 45 (RBP45), putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
55.0	100.0	GSM290555	CCR mutant M1 with array type maize from Affymetrix	GSE11531	Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
17.0	99.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.5	98.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320464	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.4	97.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9	97.7	GSM290556	CCR mutant M2 with array type maize from Affymetrix	GSE11531	Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e-5	50	Zm.9873.1.A1_at	AW330894	lichenase-2	-	8e+0	Atcg00420	-	C.G.	S.X.	Please select
0.05	7e-4	44	Zm.791.1.S1_s_at	AY111675.1	hypothetical protein LOC100280140	-	3e+0	At4g16720	60S ribosomal protein L15 (RPL15A)	C.G.	S.X.	Please select
0.01	2e-1	36	Zm.230.1.S1_at	L33913.1	aspartate kinase homoserine dehydrogenase2	-	3e-26	At1g31230	AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I)	C.G.	S.X.	Please select
0.03	7e-1	34	ZmAffx.166.1.A1_at	AI668207	hypothetical protein LOC100279427	-	1e+1	At5g57370	unknown protein	C.G.	S.X.	Please select
0.03	7e-1	34	ZmAffx.166.1.S1_at	AI668207	-	-	1e+1	At5g57370	unknown protein	C.G.	S.X.	Please select
0.03	7e-1	34	Zm.5558.1.A1_at	AY072298.1	-	-	3e-1	At3g20100	CYP705A19	C.G.	S.X.	Please select
0.03	7e-1	34	Zm.18534.1.A1_at	CO522076	protein binding protein	-	2e+1	At5g42567	-	C.G.	S.X.	Please select
0.02	7e-1	34	Zm.14501.3.A1_at	AY107741.1	NAC domain-containing protein 68	-	2e-15	At3g44110	ATJ3	C.G.	S.X.	Please select
0.03	3e+0	32	ZmAffx.1123.1.A1_at	AW288821	-	-	1e+1	At5g16890	exostosin family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	6e+0	32	Arabidopsis thaliana	At3g63050	825480	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e-1	38	Glycine max	HgAffx.2765.1.S1_at	CK350822	-	-	5e+0	Atmg00320	-	C.G.	S.X.	Please select
0.28	2e-51	202	Hordeum vulgare	M96941_at	M96941	-	-	2e+0	Atcg00770	-	C.G.	S.X.	Please select
0.26	1e-55	218	Oryza sativa	Os01g0801500	AK060529.1	-	Beta-1,3-glucanase precursor	4e-5	At5g20560	beta-1,3-glucanase, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	9e-3	42	Populus trichocarpa	PtpAffx.128825.2.S1_a_at	CK096703	hypothetical protein	-	4e-7	At5g67270	ATEB1C (microtubule end binding protein 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.29	4e-38	159	Triticum aestivum	Ta.30510.1.A1_x_at	BQ171572	-	-	2e+1	At5g55125	unknown protein	C.G.	S.X.	Please select
0.03	5e-1	34	Vitis vinifera	1619828_at	CF371771	hypothetical protein LOC100260718	-	2e-1	At4g21213	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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