CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.5732.1.A1_at

Gene name hypothetical protein LOC100272253

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.75 90.8 Zm.5732.1.A1_at AY108368.1 hypothetical protein LOC100272253 - 1e+0 At1g05780 unknown protein S.X. H.G.
0.50 65.7 Zm.4808.1.A1_at CK827550 - - 4e-8 At1g16210 unknown protein S.X. H.G.
0.50 65.7 Zm.2557.2.S1_x_at AY106871.1 DNA binding protein - 9e-6 At4g39100 SHL1 (short life) S.X. H.G.
0.46 58.4 Zm.15575.1.A1_at CD448204 - - 4e+0 At5g60400 unknown protein S.X. H.G.
0.44 55.7 ZmAffx.238.1.A1_at AI670250 - - 1e+1 At3g62140 unknown protein S.X. H.G.
0.29 28.1 Zm.3626.1.S1_at CO525384 hypothetical protein LOC100279556 - 3e-1 At4g26400 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.28 28.1 Zm.18103.1.A1_at AY187878.1 nitrate transporter - 8e-4 At1g32450 NRT1.5 (NITRATE TRANSPORTER 1.5) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.0 96.7 GSM253281 ZM_8d_SG200_3Alu_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.9 95.7 GSM253280 ZM_8d_SG200_3Alu_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.7 95.4 GSM253279 ZM_8d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.6 95.2 GSM253272 ZM_4.5d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.6 95.2 GSM253282 ZM_8d_SG200_3Alu_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.6 95.2 GSM253278 ZM_8d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.4 94.9 GSM253273 ZM_4.5d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.4 94.9 GSM253277 ZM_8d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.1 94.3 GSM253271 ZM_4.5d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.1 94.3 GSM253255 ZM_24h_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.88 5e-155 545 Zm.5732.1.A1_x_at AY108368.1 hypothetical protein LOC100272253 - 1e+0 At1g05780 unknown protein C.G. S.X.
0.42 3e-73 274 Zm.6977.3.A1_at CF626979 hypothetical protein LOC100277809 - 5e+0 At5g39720 AIG2L (AVIRULENCE INDUCED GENE 2 LIKE PROTEIN) C.G. S.X.
0.04 1e-7 56 Zm.4715.1.A1_at AI600987 - - 6e+0 At5g65660 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.05 1e-7 56 Zm.322.1.S1_at AJ297903.1 basal layer antifungal peptide - 5e+0 At5g06230 unknown protein C.G. S.X.
0.02 2e-6 52 Zm.2862.1.A1_a_at CF054010 calnexin - 6e-73 At5g61790 calnexin 1 (CNX1) C.G. S.X.
0.02 2e-6 52 Zm.2862.1.A1_at CF054010 Calnexin - 6e-73 At5g61790 calnexin 1 (CNX1) C.G. S.X.
0.04 8e-6 50 Zm.10223.1.S1_at BM078528 elongin C - 7e+0 At4g19870 kelch repeat-containing F-box family protein C.G. S.X.
0.04 3e-5 48 Zm.5781.1.A1_at CK369535 hypothetical protein LOC100278740 - 3e-14 At4g33865 40S ribosomal protein S29 (RPS29C) C.G. S.X.
0.05 3e-5 48 Zm.2984.2.A1_at CF059668 - - 3e+0 At5g39520 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Arabidopsis thaliana At1g05780 837086 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.05 6e-3 42 Glycine max GmaAffx.89050.1.A1_at CK605986 - - 6e-1 At1g29480 unknown protein C.G. S.X.
0.10 2e-3 42 Hordeum vulgare Contig5416_s_at Contig5416 - - 9e-1 At1g51140 basic helix-loop-helix (bHLH) family protein C.G. S.X.
0.25 2e-25 117 Oryza sativa Os04g0117100 AK121763.1 - Conserved hypothetical protein 1e+0 At4g03965 protein binding / zinc ion binding C.G. S.X.
0.03 6e+0 32 Populus trichocarpa PtpAffx.60092.1.S1_at DN499696 - - 9e-1 At2g20208 LCR60 (Low-molecular-weight cysteine-rich 60) C.G. S.X.
0.14 2e-8 59 Triticum aestivum Ta.20546.1.S1_x_at BJ284854 - - 1e+0 At4g03965 protein binding / zinc ion binding C.G. S.X.
0.03 5e+0 30 Vitis vinifera 1621177_at CF215740 hypothetical protein LOC100258972 - 4e+0 At1g48325 Expressed protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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