Gene omics information

Query gene ID Zm.5729.1.A1_at
Gene name peptidoglycan binding domain containing protein
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7389.9Zm.5729.1.A1_atAI637125peptidoglycan binding domain containing protein-3e-23At4g13670PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)S.X.H.G.
0.6179.5Zm.2906.1.S1_atAY110115.1somatic embryogenesis receptor-like kinase2-2e-51At1g34210SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2)S.X.H.G.
0.6179.5Zm.17172.1.A1_atAI664919--2e+0At1g55675unknown proteinS.X.H.G.
0.5976.1Zm.791.1.S1_s_atAY111675.1hypothetical protein LOC100280140-3e+0At4g1672060S ribosomal protein L15 (RPL15A)S.X.H.G.
0.5065.7Zm.12678.2.S1_atCN844593--8e-11At3g05030NHX2 (SODIUM HYDROGEN EXCHANGER 2)S.X.H.G.
0.4658.4Zm.13202.1.A1_atCA403491hypothetical protein LOC100273129-1e-8At1g56590clathrin adaptor complexes medium subunit family proteinS.X.H.G.
0.3844.2Zm.14476.2.A1_atAY109949.1Protein disulfide isomerase-1e-5At3g54960ATPDIL1-3 (PDI-LIKE 1-3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.298.5GSM253263ZM_4d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
9.298.2GSM253264ZM_4d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
8.898.1GSM320438protocol: mRNA - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.598.1GSM253262ZM_4d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
8.498.1GSM253256ZM_2d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
7.897.9GSM253276ZM_8d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
6.897.6GSM320439protocol: mRNA - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.897.2GSM320440protocol: mRNA - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.797.2GSM253257ZM_2d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
5.497.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-136Zm.972.1.A1_atBE186797hypothetical protein LOC100278676-2e+0At4g04925unknown proteinC.G.S.X.
0.013e+032Zm.6274.1.A1_atAI691216--9e-16At5g27840TOPP8C.G.S.X.
0.013e+032Zm.293.1.S1_atL46398.1MADS box protein-3e-3At3g61120AGL13 (AGAMOUS-LIKE 13)C.G.S.X.
0.013e+032Zm.10261.1.A1_atBM501576--4e-20At5g62410SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2)C.G.S.X.
0.013e+032Zm.10261.1.S1_atAY112633.1--1e-17At3g47460ATSMC2C.G.S.X.
0.011e+130ZmAffx.1337.1.S1_at11990232-85--6e-94Atcg01050-C.G.S.X.
0.021e+130Zm.5559.1.A1_atAI622696sialyltransferase like protein-7e-2At1g08660glycosyl transferase family 29 protein / sialyltransferase family proteinC.G.S.X.
0.011e+130Zm.5048.2.S1_a_atBM074541endoplasmin-3e-34At4g24190SHD (SHEPHERD)C.G.S.X.
0.031e+130Zm.4752.1.A1_atBQ538699NF-180-5e-1At4g18400unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.093e-23109Arabidopsis thalianaAt4g13670827001PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)F:unfolded protein binding, heat shock protein binding;P:protein folding, metabolic process;C:plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope;BOMPFAV---C.G.S.X.
0.026e-136Glycine maxGma.16968.1.S1_atBF325365--2e+0At1g24510T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putativeC.G.S.X.
0.167e-32137Hordeum vulgareContig14509_atContig14509--6e-23At4g13670PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)C.G.S.X.
0.182e-57224Oryza sativaOs04g0514400AK108112.1-Peptidoglycan binding-like domain containingprotein4e-1At5g57070hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.084e-240Populus trichocarpaPtpAffx.81711.1.A1_atCV276683hypothetical protein-2e-9At4g13670PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)C.G.S.X.
0.037e+032Triticum aestivumTa.5844.1.S1_atBJ290683--3e-3At5g66400RAB18 (RESPONSIVE TO ABA 18)C.G.S.X.
0.081e-446Vitis vinifera1618616_atCB343558hypothetical protein LOC100259626-5e-10At4g13670PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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