CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.5721.1.S1_at

Gene name hypothetical protein LOC100191423

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 88.2 Zm.5721.1.S1_at AI637090 hypothetical protein LOC100191423 - 9e-2 At4g12460 ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B) S.X. H.G.
0.80 94.0 Zm.7097.2.A1_a_at CF019338 hypothetical protein LOC100273341 /// 40S ribosomal protein S18 - 2e-27 At1g22780 PFL (POINTED FIRST LEAVES) S.X. H.G.
0.80 94.0 Zm.7096.1.A1_at BM338621 eukaryotic translation initiation factor 6 - 1e-29 At3g55620 emb1624 (embryo defective 1624) S.X. H.G.
0.73 89.9 Zm.7097.1.S1_at BQ279744 hypothetical protein LOC100273341 - 4e-29 At1g22780 PFL (POINTED FIRST LEAVES) S.X. H.G.
0.57 75.1 Zm.17766.1.S1_at CK371550 - - 3e+0 At5g14730 unknown protein S.X. H.G.
0.15 8.6 Zm.13039.1.A1_at AY110406.1 hypothetical protein LOC100279827 - 7e+0 At4g37409 unknown protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.0 98.6 GSM253276 ZM_8d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
11.7 98.6 GSM253264 ZM_4d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
11.0 98.5 GSM320439 protocol: mRNA - genotype: B73 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8 98.5 GSM253262 ZM_4d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
10.1 98.4 GSM320441 protocol: mRNA - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9 98.3 GSM253263 ZM_4d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
9.6 98.3 GSM253275 ZM_8d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
9.4 98.3 GSM320438 protocol: mRNA - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3 98.2 GSM320444 protocol: mRNA - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4 98.1 GSM253258 ZM_2d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.98 0 1429 Zm.5721.1.A1_a_at AY105083.1 Hypothetical protein LOC100191423 - 9e-2 At4g12460 ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B) C.G. S.X.
0.98 0 1429 Zm.5721.1.S1_a_at AI637090 hypothetical protein LOC100191423 - 9e-2 At4g12460 ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B) C.G. S.X.
0.03 3e-6 52 Zm.8181.1.A1_at BE643624 hypothetical protein LOC100193608 - 2e-1 At1g04350 2-oxoglutarate-dependent dioxygenase, putative C.G. S.X.
0.03 1e-5 50 Zm.14579.1.S1_at AY104555.1 - - 6e+0 At5g65300 unknown protein C.G. S.X.
0.02 4e-5 48 Zm.6713.1.A1_at CK828034 ATP-citrate synthase - 1e-36 At1g09430 ACLA-3 C.G. S.X.
0.03 4e-5 48 Zm.5676.1.A1_at AY103939.1 - - 3e-1 At5g14710 - C.G. S.X.
0.03 4e-5 48 Zm.5676.1.S1_at AY103939.1 hypothetical protein LOC100273716 - 3e-1 At5g14710 - C.G. S.X.
0.02 4e-5 48 Zm.4056.1.A1_at CA403994 hypothetical protein LOC100192464 - 3e+0 At4g01080 unknown protein C.G. S.X.
0.02 4e-5 48 Zm.2199.1.A1_at AI734621 transaldolase 2 - 1e-9 At5g13420 transaldolase, putative C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 9e-2 38 Arabidopsis thaliana At4g12460 826858 ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B) F:oxysterol binding;P:steroid metabolic process;C:cellular_component unknown;MFOP - - - C.G. S.X.
0.04 5e-4 46 Glycine max Gma.8908.1.S1_at BU761340 - - 8e+0 At2g21160 translocon-associated protein alpha (TRAP alpha) family protein C.G. S.X.
0.27 3e-43 174 Hordeum vulgare Contig9132_at Contig9132 - - 9e-2 At1g71750 phosphoribosyltransferase family protein C.G. S.X.
0.17 2e-72 274 Oryza sativa Os09g0532700 AK069946.1 - Alpha/beta hydrolase family protein 2e-2 At4g25290 DNA photolyase C.G. S.X.
0.06 3e-2 40 Populus trichocarpa PtpAffx.7030.1.A1_at CV240347 hypothetical protein - 4e-1 At1g05040 unknown protein C.G. S.X.
0.43 2e-70 266 Triticum aestivum TaAffx.123343.3.S1_at CA732515 - - 7e-2 At2g40210 AGL48 (AGAMOUS-LIKE 48) C.G. S.X.
0.05 3e-5 48 Vitis vinifera 1618386_at BQ800555 - - 4e-1 At1g63105 unknown protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage