CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.549.1.A1_at

Gene name glutathione S-transferase GST 21

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 81.1 Zm.549.1.A1_at AF244686.1 glutathione S-transferase GST 21 - 2e+0 At2g09840 - S.X. H.G.
0.77 92.1 Zm.12761.1.A1_at CA398326 - - 2e-6 At2g15900 phox (PX) domain-containing protein S.X. H.G.
0.71 88.2 Zm.14379.1.A1_at AY108680.1 - - 3e-19 At1g29400 AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5) S.X. H.G.
0.67 85.8 Zm.4246.1.A1_at AI438854 hypothetical protein LOC100192626 - 2e-4 At5g39510 SGR4 (SHOOT GRAVITROPSIM 4) S.X. H.G.
0.44 55.7 Zm.17333.1.A1_at CK369962 - - 3e+0 At5g21280 hydroxyproline-rich glycoprotein family protein S.X. H.G.
0.43 52.8 Zm.8630.1.A1_at BM333436 Hypothetical protein LOC100193692 - 3e-1 At5g23900 60S ribosomal protein L13 (RPL13D) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
27.9 99.7 GSM385709 Deep-sowing 10d treatment TIBA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
21.1 99.4 GSM253278 ZM_8d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
19.1 99.2 GSM385710 Deep-sowing 10d treatment TIBA, biological rep2 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
15.4 99.0 GSM253279 ZM_8d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
14.9 98.9 GSM253277 ZM_8d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
11.7 98.6 GSM253267 ZM_4d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
10.0 98.4 GSM253265 ZM_4d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
7.3 97.8 GSM253271 ZM_4.5d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
7.2 97.8 GSM320451 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1 97.7 GSM320450 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 2e-35 149 Zm.554.1.A1_at CF630610 glutathione transferase28 - 1e-1 At1g17170 ATGSTU24 (GLUTATHIONE S-TRANSFERASE TAU 24) C.G. S.X.
0.20 1e-24 113 Zm.555.1.S1_at AF244694.1 glutathione S-transferase GST 29 - 2e+0 At5g55507 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.21 3e-22 105 Zm.10134.1.A1_at BQ619055 glutathione S-transferase - 1e-1 At2g14260 PIP C.G. S.X.
0.22 4e-21 101 Zm.246.1.A1_at BM418437 glutathione transferase7 - 7e+0 At5g18180 Gar1 RNA-binding region family protein C.G. S.X.
0.07 6e-14 77 Zm.565.1.A1_at AF244705.1 glutathione transferase40 - 3e-2 At1g59700 ATGSTU16 (GLUTATHIONE S-TRANSFERASE TAU 16) C.G. S.X.
0.08 6e-14 77 Zm.548.1.S1_at AF244684.1 glutathione transferase19 - 1e-1 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) C.G. S.X.
0.11 2e-13 75 Zm.562.1.A1_at AF244702.1 glutathione transferase37 - 8e+0 At2g42590 GRF9 (GENERAL REGULATORY FACTOR 9) C.G. S.X.
0.04 4e-12 71 Zm.566.1.S1_at AF244706.1 glutathione transferase41 - 1e+1 At3g09280 unknown protein C.G. S.X.
0.06 6e-11 67 Zm.563.1.A1_at AF244703.1 glutathione S-transferase GST 38 - 2e-3 At1g59700 ATGSTU16 (GLUTATHIONE S-TRANSFERASE TAU 16) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At2g09840 815440 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 3e-3 44 Glycine max Gma.16720.1.S1_at BQ611813 glutathione S-transferase GST 13 - 3e-4 At1g74590 GSTU10 (GLUTATHIONE S-TRANSFERASE TAU 10) C.G. S.X.
0.18 4e-9 61 Hordeum vulgare Contig9887_at Contig9887 - - 9e-2 At2g21060 ATGRP2B (GLYCINE-RICH PROTEIN 2B) C.G. S.X.
0.22 8e-26 119 Oryza sativa Os01g0950000 AK064627.1 - Glutathione S-transferase, C-terminal domaincontaining protein 3e-2 At1g52220 - C.G. S.X.
0.03 3e+0 34 Populus trichocarpa PtpAffx.812.1.A1_at CV272140 hypothetical protein - 2e-6 At1g74590 GSTU10 (GLUTATHIONE S-TRANSFERASE TAU 10) C.G. S.X.
0.35 9e-126 450 Triticum aestivum TaAffx.112085.1.S1_at CA627212 - - 4e+0 At4g15710 unknown protein C.G. S.X.
0.03 9e-3 40 Vitis vinifera 1617423_at CB969252 hypothetical protein LOC100245065 - 5e-8 At1g10360 ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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