Gene omics information

Query gene ID Zm.5377.1.A1_at
Gene name PCO142509 protein
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5369.1Zm.5377.1.A1_atAY107303.1PCO142509 protein-5e-1At1g30757unknown proteinS.X.H.G.
0.7792.1Zm.15936.2.S1_atCF040236Acidic ribosomal protein P1a-7e-2At3g4459060S acidic ribosomal protein P2 (RPP2D)S.X.H.G.
0.7389.9Zm.854.1.A1_atAW066950vesicle-associated membrane protein-associated protein A-1e-2At4g00170vesicle-associated membrane family protein / VAMP family proteinS.X.H.G.
0.4759.9Zm.1284.1.S1_atBE344880--1e+1At5g50760auxin-responsive family proteinS.X.H.G.
0.4658.4Zm.5767.1.A1_atAI714844hypothetical protein LOC100273619-8e-2At3g53850-S.X.H.G.
0.3641.3Zm.17115.1.S1_atCN844978--1e+0At5g67490unknown proteinS.X.H.G.
0.1710.6Zm.15967.1.S1_s_atCA404149--2e-4At5g26830threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.098.7GSM290556CCR mutant M2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
10.398.4GSM290553WS1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
9.298.2GSM290554WS2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
9.298.2GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
8.398.0GSM202281Mo17 11-day seedling aerial tissue biological replicate 2GSE8174Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
7.997.9GSM258184Mo17 11-day seedling aerial tissue biological replicate 2GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
7.997.9GSM258193Mo17 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
7.597.8GSM202285Mo17 11-day seedling aerial tissue biological replicate 3GSE8174Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
7.597.8GSM258175Mo17 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
7.397.8GSM202406Zmet2 study 11-day seedling aerial tissue genotype Mo17 Rep2GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.261e-24113Zm.534.2.S1_atAI692057FLP1-2e-4At5g10625-C.G.S.X.
0.025e-548Zm.9549.1.S1_atAY106255.1shaggy-related protein kinase eta-3e-65At4g18710BIN2 (BRASSINOSTEROID-INSENSITIVE 2)C.G.S.X.
0.015e-548Zm.14088.1.A1_atAY104037.1aconitate hydratase, cytoplasmic-4e-19At2g05710aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putativeC.G.S.X.
0.025e-548Zm.13346.1.S1_atAY103544.1alpha tubulin4-0At1g50010TUA2C.G.S.X.
0.011e-240Zm.7659.1.S1_atAY639019.1phosphate transport protein-5e-12At5g43360PHT3 (PHOSPHATE TRANSPORTER 3)C.G.S.X.
0.015e-238Zm.2987.1.S1_atBG550493--3e-34At4g39660AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2)C.G.S.X.
0.012e-136Zm.3478.1.S1_a_atAY124703.1sucrose synthase2-4e-47At5g49190SUS2 (SUCROSE SYNTHASE 2)C.G.S.X.
0.022e-136Zm.3188.1.A1_atBM34030250S ribosomal protein L40-2e-3At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)C.G.S.X.
0.022e-136Zm.1666.1.A1_atAW574495systemin receptor SR160-7e-1At3g22800leucine-rich repeat family protein / extensin family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-136Arabidopsis thalianaAt1g30757839957unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P---C.G.S.X.
0.042e-448Glycine maxGmaAffx.90667.1.A1_atCF806392--1e+1At5g45350proline-rich family proteinC.G.S.X.
0.386e-113406Hordeum vulgareContig4320_atContig4320--3e+0At5g53030unknown proteinC.G.S.X.
0.368e-103375Oryza sativaOs02g0616100AK064829.1-Leucine-rich repeat, plant specific containingprotein4e+0At1g54200unknown proteinC.G.S.X.
0.037e-136Populus trichocarpaPtpAffx.80885.1.S1_atBP922846hypothetical protein-9e-1At3g63230unknown proteinC.G.S.X.
0.535e-115414Triticum aestivumTa.17228.1.A1_atCK209214--7e+0At3g56810unknown proteinC.G.S.X.
0.035e-134Vitis vinifera1621075_atBQ799036hypothetical protein LOC100255759-5e+0At3g50920phosphatidic acid phosphatase-related / PAP2-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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