Gene omics information

Query gene ID Zm.5362.1.A1_at
Gene name hypothetical protein LOC100193109
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.5362.1.A1_atAW498436hypothetical protein LOC100193109-1e-1At1g79860ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)S.X.H.G.
0.6785.8Zm.9236.1.A1_atBM339258--8e-2At3g01860unknown proteinS.X.H.G.
0.5571.6Zm.19044.1.S1_atCO528761--3e+0At5g53592-S.X.H.G.
0.5065.7Zm.17166.1.A1_atCK370745--4e+0At5g65730xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeS.X.H.G.
0.3233.4Zm.5796.2.S1_atAY107655.1--3e-18At5g66420-S.X.H.G.
0.158.6Zm.4271.4.A1_atBG316519hypothetical protein LOC100273684-6e-5At1g02690IMPA-6 (IMPORTIN ALPHA ISOFORM 6)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.898.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.598.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.198.4GSM290554WS2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
9.498.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.098.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.098.2GSM290553WS1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
8.298.0GSM202299Mo17xB73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
7.897.9GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
7.897.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.797.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.113e-1891Zm.6322.1.A1_atCO522931hypothetical protein LOC100279236-3e-8At4g38430ROPGEF1C.G.S.X.
0.033e-342Zm.2267.1.S1_a_atAY105804.1hypothetical protein LOC100216854-7e-7At1g79860ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)C.G.S.X.
0.033e-342Zm.2267.1.A1_atAY105804.1Hypothetical protein LOC100216854-7e-7At1g79860ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)C.G.S.X.
0.033e-342Zm.2267.1.S1_atAY105804.1--7e-7At1g79860ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)C.G.S.X.
0.022e-136Zm.13162.1.A1_atCO521967--9e-3At3g02040SRG3 (senescence-related gene 3)C.G.S.X.
0.027e-134Zm.6252.1.A1_atCF630074hypothetical protein LOC100273493-8e-9At1g76200unknown proteinC.G.S.X.
0.027e-134Zm.6239.1.S1_a_atBG841075hypothetical protein LOC100274136-3e-18At2g3206040S ribosomal protein S12 (RPS12C)C.G.S.X.
0.017e-134Zm.4423.1.A1_atAI714792hypothetical protein LOC100191726-1e-3At4g31170protein kinase family proteinC.G.S.X.
0.017e-134Zm.2298.2.A1_a_atBQ619139hypothetical protein LOC100192687-1e-21At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-138Arabidopsis thalianaAt1g79860844325ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth.---C.G.S.X.
0.022e+034Glycine maxPsAffx.CL178Contig1_atPsAffx.CL178Contig1--1e-2At1g04410malate dehydrogenase, cytosolic, putativeC.G.S.X.
0.315e-36151Hordeum vulgareContig22760_atContig22760--2e-6At5g02010ROPGEF7C.G.S.X.
0.204e-58226Oryza sativaOs05g0454200AK101945.1-Protein of unknown function DUF315 domaincontaining protein1e-15At4g38430ROPGEF1C.G.S.X.
0.061e-138Populus trichocarpaPtpAffx.109943.1.A1_atCK097326hypothetical protein-1e-10At5g02010ROPGEF7C.G.S.X.
0.121e-1687Triticum aestivumTaAffx.36870.1.A1_atBJ310746--1e+0At5g25422unknown proteinC.G.S.X.
0.028e+030Vitis vinifera1621325_atCK136903.1--3e-23At1g5766060S ribosomal protein L21 (RPL21E)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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