Gene omics information

Query gene ID	Zm.5230.1.A1_at
Gene name	acyl-desaturase
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.41	49.7	Zm.5230.1.A1_at	CA404914	acyl-desaturase	-	2e-17	At2g43710	SSI2	S.X.	H.G.	Please select
0.82	94.6	Zm.16316.1.A1_at	CF244157	ATP binding protein	-	2e-1	At5g19210	DEAD/DEAH box helicase, putative	S.X.	H.G.	Please select
0.78	92.5	ZmAffx.525.1.A1_at	AI711680	-	-	8e-1	At5g23170	protein kinase family protein	S.X.	H.G.	Please select
0.67	85.8	ZmAffx.1017.1.A1_at	AI881523	Hypothetical protein LOC100193713	-	3e+0	At3g25030	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.67	85.8	Zm.18038.1.S1_at	CD219308	-	-	2e+1	At5g66700	HB53	S.X.	H.G.	Please select
0.53	69.1	Zm.1134.1.A1_at	AY112160.1	hypothetical protein LOC100193278	-	3e+0	At2g26940	zinc finger (C2H2 type) family protein	S.X.	H.G.	Please select
0.46	58.4	Zm.5070.1.A1_at	AY108736.1	hypothetical protein LOC100193023	-	2e-16	At1g22950	iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	S.X.	H.G.	Please select
0.46	58.4	Zm.11338.1.A1_at	BM349130	hypothetical protein LOC100274516	-	3e-6	At2g40190	glycosyl transferase family 1 protein	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.4	97.0	GSM206309	Lower pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.7	96.5	GSM206303	Upper pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.4	96.2	GSM206302	Upper pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.3	96.1	GSM206310	Lower pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.2	96.0	GSM206325	Upper pulvinus 5 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.2	96.0	GSM206332	Lower pulvinus 15 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.1	95.9	GSM206300	Upper pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.1	95.9	GSM206304	Upper pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.1	95.9	GSM206308	Lower pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.1	95.9	GSM206307	Lower pulvinus 5 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.29	1e-34	147	Zm.14048.1.A1_at	CD446343	hypothetical protein LOC100191672	-	5e-30	At3g02630	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	C.G.	S.X.	Please select
0.10	8e-21	101	Zm.4015.2.A1_at	CD435491	hypothetical protein LOC100192652	-	2e-15	At3g02630	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	C.G.	S.X.	Please select
0.08	1e-7	57	Zm.13128.1.A1_at	CA401861	hypothetical protein LOC100273826	-	1e-8	At1g43800	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	C.G.	S.X.	Please select
0.03	2e-3	44	Zm.4682.1.S1_at	AI737946	acyl-desaturase	-	1e-1	At5g16230	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.659.1.S1_at	AF366297.1	hypothetical protein LOC100191749	-	4e-3	At1g69500	electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.6357.2.A1_at	AI691958	hypothetical protein LOC100194201	-	1e-7	At3g15680	zinc finger (Ran-binding) family protein	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.4729.1.A1_at	AI738324	-	-	9e-17	At5g55230	ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1)	C.G.	S.X.	Please select
0.02	4e-1	36	Zm.400.2.A1_at	AI677573	hypothetical protein LOC100193944	-	3e-28	At3g06483	PDK (PYRUVATE DEHYDROGENASE KINASE)	C.G.	S.X.	Please select
0.02	4e-1	36	Zm.400.2.S1_at	AI677573	Pyruvate dehydrogenase (lipoamide) kinase1	-	3e-28	At3g06483	PDK (PYRUVATE DEHYDROGENASE KINASE)	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.28	2e-17	91	Arabidopsis thaliana	At2g43710	818973	SSI2	Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.23	2e-30	135	Glycine max	Gma.6256.1.S1_s_at	L34346.1	stearoyl-acyl carrier protein desaturase /// stearoyl-ACP desaturase 2	-	7e-63	At2g43710	SSI2	C.G.	S.X.	Please select
0.57	0	912	Hordeum vulgare	Contig3625_at	Contig3625	-	-	8e-32	At3g02630	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	C.G.	S.X.	Please select
0.57	0	1122	Oryza sativa	Os04g0379900	D38753.1	-	Acyl-[acyl-carrier-protein] desaturase,chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACPdesaturase)	6e-48	At2g43710	SSI2	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.24	2e-30	135	Populus trichocarpa	PtpAffx.207806.1.S1_at	pmrna15514	hypothetical protein	-	4e-76	At5g16240	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.54	0	886	Triticum aestivum	Ta.1250.1.S1_at	CD934434	-	-	8e-29	At3g02630	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	C.G.	S.X.	Please select
0.35	2e-94	345	Vitis vinifera	1608296_at	BQ799613	hypothetical protein LOC100242444	-	3e-127	At2g43710	SSI2	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage