Gene omics information

Query gene ID Zm.5229.1.A1_at
Gene name ATP-dependent transporter ycf16
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6179.5Zm.5229.1.A1_atCO519750ATP-dependent transporter ycf16-4e-24At3g10670ATNAP7S.X.H.G.
0.6077.8Zm.859.1.A1_atCF060267hypothetical protein LOC100191283-8e-1At4g28420aminotransferase, putativeS.X.H.G.
0.5065.7Zm.15306.1.A1_atCK369690phytol kinase-9e+0Atmg00160-S.X.H.G.
0.4455.7Zm.12954.1.A1_atAW066601ADP-ribosylation factor-1e-26At2g18390TTN5 (TITAN 5)S.X.H.G.
0.3131.6Zm.17849.1.S1_atAY110409.1hypothetical protein LOC100192672-1e-71At1g10950endomembrane protein 70, putativeS.X.H.G.
0.158.6Zm.17189.1.A1_atBM268883--5e+0At5g60540PDX2 (PYRIDOXINE BIOSYNTHESIS 2)S.X.H.G.
0.083.4Zm.9194.1.A1_atBM267243--1e+0At3g03456unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.095.8GSM253251ZM_24h_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
4.095.8GSM320443protocol: mRNA - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.995.7GSM253247ZM_12h_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
3.695.2GSM253248ZM_12h_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
3.595.1GSM253252ZM_24h_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
3.494.9GSM323171Zm_SG200Dpep1_24hpi_IIGSE12892Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
3.494.9GSM253255ZM_24h_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
3.494.9GSM253245ZM_12h_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
3.394.7GSM253246ZM_12h_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
3.194.3GSM253244ZM_12h_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-342Zm.12890.1.S1_atCA401159BES1/BZR1 protein-2e+0At2g17420NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)C.G.S.X.
0.018e-238Zm.6713.2.A1_atCK369338hypothetical protein LOC100273868-2e-84At1g09430ACLA-3C.G.S.X.
0.038e-238Zm.13133.1.S1_atCA404786hypothetical protein LOC100274058-2e-4At3g06300AT-P4H-2 (A. THALIANA P4H ISOFORM 2)C.G.S.X.
0.018e-238Zm.10520.1.S1_atBQ529214hypothetical protein LOC100274894-2e-4At4g20940leucine-rich repeat family proteinC.G.S.X.
0.013e-136Zm.655.1.A1_atAF318580.1Glk1 protein-1e-6At5g44190GLK2 (GOLDEN2-LIKE 2)C.G.S.X.
0.013e-136Zm.6194.1.A1_atAW519914RS21-C6 protein-3e-5At3g25400-C.G.S.X.
0.013e-136Zm.12556.1.S1_atCD982182--2e-9At1g27530-C.G.S.X.
0.023e-136Zm.11710.1.A1_atBM380117--1e+0At5g15853unknown proteinC.G.S.X.
0.021e+034Zm.9758.1.A1_atBM332963--4e+0At4g39190unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.194e-24113Arabidopsis thalianaAt3g10670820236ATNAP7Plastidic SufC-like ATP-binding cassette/ATPase essential for Arabidopsis embryogenesis. Involved in the biogenesis and/or repair of oxidatively damaged FeS clusters. Expressed in embryos and meristems.---C.G.S.X.
0.021e+036Glycine maxGmaAffx.3983.1.A1_s_atAW349138--9e-1At2g35700ERF38 (ERF FAMILY PROTEIN 38)C.G.S.X.
0.440714Hordeum vulgareContig4684_atContig4684--5e-17At3g10670ATNAP7C.G.S.X.
0.361e-68262Oryza sativaOs.4959.1.S1_at---0C.G.S.X.
0.083e-448Populus trichocarpaPtp.429.1.A1_s_atBP935484white-brown-complex ABC transporter family-1e-19At3g10670ATNAP7C.G.S.X.
0.473e-136486Triticum aestivumTa.12928.1.A1_atCD491404--6e-15At3g10670ATNAP7C.G.S.X.
0.124e-1891Vitis vinifera1618798_s_atCF213901hypothetical protein LOC100243733-2e-20At3g10670ATNAP7C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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