CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.522.1.S1_at

Gene name cellulose synthase7

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.0 Zm.522.1.S1_at AF200531.1 cellulose synthase7 - 1e-38 At2g21770 CESA9 (CELLULOSE SYNTHASE A9) S.X. H.G.
0.67 85.8 Zm.2699.1.A1_at AW066891 hypothetical protein LOC100193918 - 1e+1 At5g16170 unknown protein S.X. H.G.
0.60 77.8 Zm.10123.1.S1_at BM380717 heat- and acid-stable phosphoprotein - 3e-14 At5g46020 unknown protein S.X. H.G.
0.57 75.1 Zm.8576.1.A1_at BM074724 caffeic acid 3-O-methyltransferase - 4e-2 At5g54160 ATOMT1 (O-METHYLTRANSFERASE 1) S.X. H.G.
0.50 65.7 Zm.9194.1.A1_at BM267243 - - 1e+0 At3g03456 unknown protein S.X. H.G.
0.40 48.5 Zm.2602.1.S1_at AY109922.1 hypothetical protein LOC100217277 - 1e-2 At5g24340 3'-5' exonuclease domain-containing protein S.X. H.G.
0.25 21.3 Zm.6439.2.A1_at AI881500 eucaryotic initiation factor7 - 7e-14 At5g35620 LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.7 96.5 GSM206323 Left pulvinus control polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.7 96.5 GSM206330 Lower pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.6 96.4 GSM206329 Right pulvinus control polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.6 96.4 GSM206333 Lower pulvinus 30 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.5 96.3 GSM206324 Upper pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.1 95.9 GSM206325 Upper pulvinus 5 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.1 95.9 GSM206311 Left pulvinus control total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.9 95.7 GSM206301 Upper pulvinus 5 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.9 95.7 GSM206334 Lower pulvinus 60 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.7 95.4 GSM206331 Lower pulvinus 5 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.69 0 1796 Zm.521.1.S1_at AF200530.1 cellulose synthase6 - 1e-20 At2g21770 CESA9 (CELLULOSE SYNTHASE A9) C.G. S.X.
0.58 0 1005 Zm.7166.1.A1_at AF200532.1 cellulose synthase8 - 3e-36 At4g39350 CESA2 (CELLULOSE SYNTHASE A2) C.G. S.X.
0.12 1e-43 178 ZmAffx.5.1.S1_at AY372246.1 cellulose synthase catalytic subunit 12 - 4e-26 At5g17420 IRX3 (IRREGULAR XYLEM 3) C.G. S.X.
0.23 1e-30 135 Zm.518.1.A1_at AF200526.1 cellulose synthase-2 - 9e-120 At4g32410 CESA1 (CELLULOSE SYNTHASE 1) C.G. S.X.
0.24 8e-29 129 Zm.2396.1.A1_at AF200529.1 cellulose synthase5 - 3e-104 At5g05170 CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1) C.G. S.X.
0.21 3e-28 127 ZmAffx.13.1.S1_s_at AY372245.1 cellulose synthase 11 - 2e-61 At4g18780 IRX1 (IRREGULAR XYLEM 1) C.G. S.X.
0.19 1e-24 115 Zm.520.1.S1_x_at AF200528.1 cellulose synthase-4 - 2e-74 At5g05170 CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1) C.G. S.X.
0.19 1e-24 115 Zm.520.1.S1_at AF200528.1 cellulose synthase-4 - 2e-74 At5g05170 CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1) C.G. S.X.
0.24 2e-23 111 Zm.15912.1.S1_at AF200525.1 cellulose synthase-1 - 2e-99 At4g32410 CESA1 (CELLULOSE SYNTHASE 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 1e-38 163 Arabidopsis thaliana At2g21770 816713 CESA9 (CELLULOSE SYNTHASE A9) cellulose synthase, related to CESA6. - - - C.G. S.X.
0.14 2e-13 79 Glycine max GmaAffx.76730.1.S1_at AW202151 - - 6e-76 At4g32410 CESA1 (CELLULOSE SYNTHASE 1) C.G. S.X.
0.18 1e-21 105 Hordeum vulgare Contig4451_s_at Contig4451 - - 4e-68 At4g32410 CESA1 (CELLULOSE SYNTHASE 1) C.G. S.X.
0.72 0 1584 Oryza sativa Os03g0837100 AK100877.1 - Cellulose synthase-7 2e-34 At2g21770 CESA9 (CELLULOSE SYNTHASE A9) C.G. S.X.
0.41 3e-74 282 Populus trichocarpa PtpAffx.38017.1.S1_x_at AY196961.1 hypothetical protein - 5e-72 At4g39350 CESA2 (CELLULOSE SYNTHASE A2) C.G. S.X.
0.66 0 1132 Triticum aestivum Ta.6466.1.S1_at BE431148 - - 1e-29 At5g09870 CESA5 (CELLULOSE SYNTHASE 5) C.G. S.X.
0.28 2e-115 416 Vitis vinifera 1606646_at CA812296 hypothetical protein LOC100264115 - 2e-23 At5g09870 CESA5 (CELLULOSE SYNTHASE 5) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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