CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.5132.1.A1_at

Gene name calcium lipid binding protein-like

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.5132.1.A1_at AY105555.1 calcium lipid binding protein-like - 7e-1 At1g15320 unknown protein S.X. H.G.
0.63 81.1 Zm.13528.1.A1_at CO529656 hypothetical protein LOC100216925 - 4e-1 At2g18860 syntaxin family protein S.X. H.G.
0.55 71.6 Zm.144.2.A1_at BE123186 Metallothionein2 - 1e+1 At3g58370 K-Cl Co-transporter type 1 protein-related / KCC1 protein-related S.X. H.G.
0.50 65.7 ZmAffx.1053.1.A1_at AI881846 - - 3e+0 At1g16240 SYP51 (SYNTAXIN OF PLANTS 51) S.X. H.G.
0.27 24.6 Zm.19054.1.A1_at CO534445 bile acid sodium symporter/ transporter - 3e+0 At5g03660 unknown protein S.X. H.G.
0.22 16.9 Zm.19103.1.S1_at CF625279 hypothetical protein LOC100193224 - 3e+0 At4g09490 RNase H domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.9 95.7 GSM206299 Left pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.8 95.5 GSM206310 Lower pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.8 95.5 GSM206298 Lower pulvinus 60 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.8 95.5 GSM206288 Upper pulvinus 2 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.6 95.2 GSM206324 Upper pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.5 95.1 GSM206330 Lower pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.5 95.1 GSM206305 Right pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.5 95.1 GSM206292 Upper pulvinus 60 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.3 94.7 GSM206297 Lower pulvinus 30 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.3 94.7 GSM206291 Upper pulvinus 30 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 5e-37 155 ZmAffx.443.1.A1_at AI677012 hypothetical protein LOC100192771 - 2e-1 At3g19000 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
0.13 5e-37 155 ZmAffx.443.1.S1_at AI677012 Hypothetical protein LOC100192771 - 2e-1 At3g19000 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
0.02 1e+0 34 Zm.9987.1.A1_at BM335812 - - 9e-2 At5g12190 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.01 1e+0 34 Zm.6882.1.A1_s_at AI621509 hypothetical protein LOC100191222 /// hypothetical protein LOC100193000 /// triosephosphate isomerase - 7e-7 At2g21170 TIM (TRIOSEPHOSPHATE ISOMERASE) C.G. S.X.
0.01 1e+0 34 Zm.6882.1.S1_at AY109336.1 - - 7e-7 At2g21170 TIM (TRIOSEPHOSPHATE ISOMERASE) C.G. S.X.
0.01 5e+0 32 Zm.9596.1.A1_at BM336182 - - 4e-1 At5g44350 ethylene-responsive nuclear protein -related C.G. S.X.
0.01 5e+0 32 Zm.8655.1.A1_at BM075075 - - 5e+0 At4g14540 NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3) C.G. S.X.
0.01 5e+0 32 Zm.631.1.S1_at AF079428.1 recombination protein51 gene a - 3e-74 At5g20850 ATRAD51 C.G. S.X.
0.01 5e+0 32 Zm.3300.1.A1_at CO519956 DNA binding protein - 2e-1 At4g18680 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-1 36 Arabidopsis thaliana At1g15320 838101 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.11 1e-9 65 Glycine max Gma.6356.1.S1_at CD408561 - - 4e-8 At1g20080 SYTB C.G. S.X.
0.41 9e-82 303 Hordeum vulgare Contig7799_at Contig7799 - - 5e-18 At2g20990 SYTA (SYNAPTOTAGMIN A) C.G. S.X.
0.44 1e-108 395 Oryza sativa Os.31128.2.S1_at - - - 0 C.G. S.X.
0.10 1e-3 46 Populus trichocarpa PtpAffx.63788.1.S1_s_at CV227596 plant synaptotagmin - 5e-3 At1g20080 SYTB C.G. S.X.
0.45 2e-90 333 Triticum aestivum Ta.26924.1.S1_at CD454764 - - 2e-10 At2g20990 SYTA (SYNAPTOTAGMIN A) C.G. S.X.
0.08 5e-2 38 Vitis vinifera 1611946_s_at CF373318 hypothetical protein LOC100260940 - 1e-1 At5g04220 SYTC C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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