Gene omics information

Query gene ID Zm.5121.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4455.7Zm.5121.1.S1_atCD441115--2e+0At2g15570thioredoxin M-type 3, chloroplast (TRX-M3)S.X.H.G.
0.6785.8Zm.12740.1.S1_atCA404183hypothetical protein LOC100194228-4e-12At5g40440ATMKK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3)S.X.H.G.
0.5571.6Zm.1274.1.S1_atCO533399hypothetical protein LOC100272786-7e-1At2g38550unknown proteinS.X.H.G.
0.3641.3ZmAffx.706.1.A1_atAI738209--8e-1At1g23590unknown proteinS.X.H.G.
0.147.7Zm.13737.2.S1_atAI065573hypothetical protein LOC100272721-6e-54At4g08900arginaseS.X.H.G.
0.115.3Zm.10798.1.A1_atCF003582Hypothetical protein LOC100191405-1e-2At1g26930kelch repeat-containing F-box family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
38.099.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
34.899.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
33.599.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.299.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.499.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.899.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.099.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.199.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.999.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.797.2GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9801768Zm.5121.1.A1_atCF005393--2e+0At2g15570thioredoxin M-type 3, chloroplast (TRX-M3)C.G.S.X.
0.038e-134Zm.5373.1.S1_atBF728005hypothetical protein LOC100276438-1e+0At5g26170WRKY50C.G.S.X.
0.023e+032Zm.7562.1.A1_a_atCF048336--2e+0At5g53530VPS26A (VACUOLAR PROTEIN SORTING 26A)C.G.S.X.
0.023e+032Zm.7562.1.A1_atCF048336hypothetical protein LOC100274090-2e+0At5g53530VPS26A (VACUOLAR PROTEIN SORTING 26A)C.G.S.X.
0.023e+032Zm.6224.1.S1_a_atCF627440FK506-binding protein 2-1-3e-8At5g48580FKBP15-2C.G.S.X.
0.013e+032Zm.5069.1.A1_atAY111851.1hypothetical protein LOC100192804-2e-4At1g61460S-locus protein kinase, putativeC.G.S.X.
0.013e+032Zm.4333.1.A1_atAY104402.1--9e-20At4g33090APM1 (AMINOPEPTIDASE M1)C.G.S.X.
0.021e+130ZmAffx.668.1.A1_atAI734374Hypothetical protein LOC100191349-5e-8At5g19980integral membrane family proteinC.G.S.X.
0.021e+130ZmAffx.668.1.S1_atAI734374hypothetical protein LOC100191349-5e-8At5g19980integral membrane family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt2g15570816050thioredoxin M-type 3, chloroplast (TRX-M3)chloroplast protein similar to prokaryotic thioredoxin.---C.G.S.X.
0.033e+034Glycine maxGma.17738.1.S1_atBF070459--9e-10At5g10480PAS2 (PASTICCINO 2)C.G.S.X.
0.036e-238Hordeum vulgarerbaal13j08_atrbaal13j08--1e+0At3g57110unknown proteinC.G.S.X.
0.034e+034Oryza sativaOsAffx.2909.1.S1_at---0C.G.S.X.
0.023e+034Populus trichocarpaPtpAffx.3296.1.S1_atDN486650--2e+0At4g26290unknown proteinC.G.S.X.
0.032e+034Triticum aestivumTa.4383.1.A1_atBE429385--1e+0At5g27020unknown proteinC.G.S.X.
0.022e+032Vitis vinifera1620817_atCB341464hypothetical protein LOC100251782-1e+0At5g25360unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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