CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.5064.1.S1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 81.1 Zm.5064.1.S1_at CA399210 - - 2e-24 At1g29880 glycyl-tRNA synthetase / glycine--tRNA ligase S.X. H.G.
0.67 85.8 Zm.1360.1.S1_x_at AW927383 hypothetical protein LOC100276510 - 6e-1 At4g27890 nuclear movement family protein S.X. H.G.
0.44 55.7 ZmAffx.165.1.S1_at AI668200 - - 3e+0 At3g28760 - S.X. H.G.
0.30 29.8 Zm.39.1.S1_at D87042.1 Calcium-dependent protein kinase - 1e-25 At4g35310 CPK5 (calmodulin-domain protein kinase 5) S.X. H.G.
0.24 19.8 Zm.2034.1.S1_at BE123271 hypothetical protein LOC100277458 - 1e+0 At1g18800 NRP2 (NAP1-RELATED PROTEIN 2) S.X. H.G.
0.13 6.8 Zm.3783.1.S1_at AW331211 Betaine aldehyde dehydrogenase - 6e-4 At3g48170 ALDH10A9 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.4 98.5 GSM205366 B73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
9.7 98.3 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
9.6 98.3 GSM205374 B73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
9.2 98.2 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
8.9 98.2 GSM205372 B73xMo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
8.7 98.1 GSM205368 B73xMo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
8.6 98.1 GSM205371 Mo17xB73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
7.9 97.9 GSM205365 Mo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
7.8 97.9 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
7.7 97.9 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.48 0 1069 Zm.5064.2.A1_at CN844999 - - 4e-5 At1g29880 glycyl-tRNA synthetase / glycine--tRNA ligase C.G. S.X.
0.45 0 1069 Zm.5064.2.S1_at CN844999 - - 4e-5 At1g29880 glycyl-tRNA synthetase / glycine--tRNA ligase C.G. S.X.
0.28 1e-29 131 Zm.4311.1.S1_at AY105462.1 - - 1e-31 At1g29880 glycyl-tRNA synthetase / glycine--tRNA ligase C.G. S.X.
0.02 6e-7 56 Zm.9604.1.A1_at BM333654 - - 6e+0 At3g44740 ATP binding / aminoacyl-tRNA ligase/ glycine-tRNA ligase/ nucleotide binding C.G. S.X.
0.01 4e-2 40 Zm.3699.7.S1_at CK371636 Ribosomal proteinS6 - 1e-60 At4g31700 RPS6 (RIBOSOMAL PROTEIN S6) C.G. S.X.
0.01 4e-2 40 Zm.3699.7.S1_a_at CK371636 ribosomal proteinS6 - 1e-60 At4g31700 RPS6 (RIBOSOMAL PROTEIN S6) C.G. S.X.
0.01 1e-1 38 Zm.516.1.A1_at AF295599.1 ribosomal protein s6 RPS6-2 - 6e-69 At5g10360 EMB3010 (embryo defective 3010) C.G. S.X.
0.01 1e-1 38 Zm.3699.1.S1_x_at U92045.1 ribosomal proteinS6 - 1e-75 At4g31700 RPS6 (RIBOSOMAL PROTEIN S6) C.G. S.X.
0.01 1e-1 38 Zm.3699.1.S1_at U92045.1 ribosomal proteinS6 - 1e-75 At4g31700 RPS6 (RIBOSOMAL PROTEIN S6) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 2e-24 115 Arabidopsis thaliana At1g29880 839866 glycyl-tRNA synthetase / glycine--tRNA ligase F:glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding;P:response to cadmium ion, glycyl-tRNA aminoacylation;C:mitochondrion;OBAMFP - - - C.G. S.X.
0.15 1e-29 133 Glycine max Gma.16782.1.S1_at CD412337 - - 2e-41 At1g29880 glycyl-tRNA synthetase / glycine--tRNA ligase C.G. S.X.
0.67 0 1614 Hordeum vulgare Contig6502_at Contig6502 - - 3e-38 At1g29880 glycyl-tRNA synthetase / glycine--tRNA ligase C.G. S.X.
0.68 0 1725 Oryza sativa Os08g0538000 AK119836.1 - Glycyl-tRNA synthetase, alpha2 dimer familyprotein 7e-27 At1g29880 glycyl-tRNA synthetase / glycine--tRNA ligase C.G. S.X.
0.14 1e-32 143 Populus trichocarpa PtpAffx.71501.1.S1_at CK092072 hypothetical protein - 4e-84 At1g29880 glycyl-tRNA synthetase / glycine--tRNA ligase C.G. S.X.
0.31 2e-153 543 Triticum aestivum Ta.30660.3.S1_at CK171003 - - 3e-3 At3g44740 ATP binding / aminoacyl-tRNA ligase/ glycine-tRNA ligase/ nucleotide binding C.G. S.X.
0.18 4e-47 188 Vitis vinifera 1613168_at CB971028 hypothetical protein LOC100257704 - 4e-42 At1g29880 glycyl-tRNA synthetase / glycine--tRNA ligase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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