Gene omics information

Query gene ID	Zm.5058.1.A1_at
Gene name	hypothetical protein LOC100217195
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.65	82.1	Zm.5058.1.A1_at	BG266535	hypothetical protein LOC100217195	-	4e+0	At4g33960	unknown protein	S.X.	H.G.	Please select
0.73	89.9	Zm.1519.1.S1_at	AF033263.1	blue-light receptor phototropin 1	-	5e-16	At3g45780	PHOT1 (PHOTOTROPIN 1)	S.X.	H.G.	Please select
0.63	81.1	Zm.1704.1.S1_at	BM380131	hypothetical protein LOC100217212	-	1e+0	At1g78190	unknown protein	S.X.	H.G.	Please select
0.61	79.5	Zm.12977.1.S1_a_at	AY105605.1	hypothetical protein LOC100193319	-	1e-4	At1g15370	-	S.X.	H.G.	Please select
0.56	74.4	Zm.6453.1.S1_at	AY106427.1	-	-	3e-1	At5g33390	glycine-rich protein	S.X.	H.G.	Please select
0.45	56.4	Zm.16475.3.S1_at	CF019135	-	-	2e-7	At2g30260	U2B'' (U2 small nuclear ribonucleoprotein B)	S.X.	H.G.	Please select
0.44	55.7	Zm.19120.1.A1_at	CO523709	hypothetical protein LOC100272621	-	4e-7	At3g20810	transcription factor jumonji (jmjC) domain-containing protein	S.X.	H.G.	Please select
0.44	55.7	Zm.15194.1.A1_at	BM334114	-	-	4e+0	At1g16025	unknown protein	S.X.	H.G.	Please select
0.44	55.7	Zm.494.2.S1_at	BE056113	Prohibitin1	-	3e+0	At5g17510	unknown protein	S.X.	H.G.	Please select
0.44	55.7	Zm.8138.1.A1_at	BM336608	tubby protein	-	1e-3	At1g25280	AtTLP10 (TUBBY LIKE PROTEIN 10)	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
18.8	99.2	GSM253273	ZM_4.5d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
14.7	98.9	GSM253272	ZM_4.5d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
8.5	98.1	GSM253271	ZM_4.5d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
6.8	97.6	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.2	97.4	GSM202307	B73xMo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.5	97.1	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.5	97.1	GSM202295	Mo17xB73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.4	97.0	GSM253266	ZM_4d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
5.4	97.0	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.4	97.0	GSM202302	B73xMo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.31	6e-34	143	Zm.7803.1.A1_at	CF005573	Hypothetical protein LOC100193615	-	5e+0	At4g33960	unknown protein	C.G.	S.X.	Please select
0.02	7e-3	40	Zm.297.1.S1_at	CO527021	CMP-KDO synthetase1	-	2e-13	At1g53000	cytidylyltransferase family	C.G.	S.X.	Please select
0.02	4e-1	34	Zm.6057.1.S1_at	CD437092	glycine-rich protein 2b	-	5e-1	At4g38680	GRP2 (GLYCINE RICH PROTEIN 2)	C.G.	S.X.	Please select
0.02	4e-1	34	Zm.4870.1.A1_a_at	CK985786	dehydrin	-	7e-4	At3g50980	XERO1 (DEHYDRIN XERO 1)	C.G.	S.X.	Please select
0.02	4e-1	34	Zm.4870.1.A1_x_at	CK985786	dehydrin	-	7e-4	At3g50980	XERO1 (DEHYDRIN XERO 1)	C.G.	S.X.	Please select
0.02	4e-1	34	Zm.4870.2.S1_a_at	CF023956	dehydrin	-	3e-6	At3g50980	XERO1 (DEHYDRIN XERO 1)	C.G.	S.X.	Please select
0.06	4e-1	34	Zm.4654.1.A1_a_at	AI666008	hypothetical protein LOC100272406	-	2e-4	At1g72210	basic helix-loop-helix (bHLH) family protein (bHLH096)	C.G.	S.X.	Please select
0.06	4e-1	34	Zm.4654.1.A1_x_at	AI666008	hypothetical protein LOC100272406	-	2e-4	At1g72210	basic helix-loop-helix (bHLH) family protein (bHLH096)	C.G.	S.X.	Please select
0.03	2e+0	32	Zm.9913.1.A1_at	BM337435	hypothetical protein LOC100273834	-	1e+0	At3g03826	unknown protein	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	4e+0	32	Arabidopsis thaliana	At4g33960	829542	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	PsAffx.psZS010xJ15f_s_at	PsAffx.psZS010xJ15f	-	-	1e+1	At5g24110	WRKY30	C.G.	S.X.	Please select
0.18	3e-2	38	Hordeum vulgare	HVSMEf0021A05r2_at	HVSMEf0021A05r2	-	-	8e-1	At1g27730	STZ (salt tolerance zinc finger)	C.G.	S.X.	Please select
0.27	2e-55	216	Oryza sativa	Os02g0759000	AK107898.1	-	-	6e-3	At2g46810	basic helix-loop-helix (bHLH) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	5e+0	32	Populus trichocarpa	PtpAffx.6000.1.A1_at	CV250692	-	-	1e-9	At1g06515	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	3e-1	36	Triticum aestivum	TaAffx.51919.1.S1_at	CA716395	-	-	3e+0	At5g39650	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	Vitis vinifera	1606961_at	CA818566	-	-	2e-5	At3g26740	CCL (CCR-LIKE)	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage