Gene omics information

Query gene ID Zm.4977.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5571.6Zm.4977.1.S1_atAY109232.1--2e-1At1g58360AAP1 (AMINO ACID PERMEASE 1)S.X.H.G.
0.6785.8Zm.1322.1.A1_atAI737263hypothetical protein LOC100279212-5e-31At3g02760ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/ nucleotide bindingS.X.H.G.
0.6785.8---0S.X.H.G.
0.4658.4Zm.16861.2.S1_atAW498347L-ascorbate oxidase-7e-4At1g55570sks12 (SKU5 Similar 12)S.X.H.G.
0.3844.2Zm.2758.1.A1_atAW067110--2e-6At2g25730unknown proteinS.X.H.G.
0.2928.1Zm.3623.1.S1_atBG873827hypothetical protein LOC100216808-7e+0At5g52440HCF106S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.299.7GSM205433B73 19 DAP endosperm tissue biological replicate 3GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
21.999.4GSM205436B73xMo17 19 DAP endosperm tissue biological replicate 3GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
21.399.4GSM205425B73 19 DAP endosperm tissue biological replicate 2GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
21.299.4GSM205429B73xMo17 19 DAP endosperm tissue biological replicate 2GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
18.199.2GSM205421B73 19 DAP endosperm tissue biological replicate 1GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
17.599.1GSM205423B73xMo17 19 DAP endosperm tissue biological replicate 1GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
15.599.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.998.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.298.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.698.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.073e-859Zm.16510.1.A1_atCK347176--8e-10At1g77380AAP3C.G.S.X.
0.013e-240Zm.11468.1.A1_atBM382262--5e-1At5g46790unknown proteinC.G.S.X.
0.021e-138Zm.4457.1.A1_atBG266182hypothetical protein LOC100194059 /// hypothetical protein LOC100276691-1e+0At1g78790unknown proteinC.G.S.X.
0.014e-136Zm.283.1.S1_atAY254104.1benzoxazinless1-5e-2At4g01220-C.G.S.X.
0.024e-136Zm.1863.1.S1_atAW498133--9e-1At3g15250unknown proteinC.G.S.X.
0.034e-136Zm.18283.1.A1_atBG841297hypothetical protein LOC100217202 /// hypothetical protein LOC100217213-5e+0At5g49540unknown proteinC.G.S.X.
0.024e-136Zm.17337.1.A1_atCO518294hypothetical protein LOC100279459-9e-2At5g23810AAP7C.G.S.X.
0.014e-136Zm.1495.1.A1_atAY109698.1Asr protein-3e-1At4g04930DES-1-LIKEC.G.S.X.
0.024e-136Zm.12705.1.S1_atCD440320--7e-10At5g20160ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-138Arabidopsis thalianaAt1g58360842205AAP1 (AMINO ACID PERMEASE 1)Encodes AAP1 (amino acid permease 1), a neutral amino acid transporter expressed in seeds. Functions in amino acid uptake into embryos.---C.G.S.X.
0.031e+036Glycine maxPsAffx.C85000040_atPsAffx.C85000040--1e+1At4g02430pre-mRNA splicing factor, putative / SR1 protein, putativeC.G.S.X.
0.142e-1273Hordeum vulgareContig14547_atContig14547--3e-6At5g49630AAP6 (AMINO ACID PERMEASE 6)C.G.S.X.
0.7101316Oryza sativaOs01g0878700AK121636.1-Amino acid/polyamine transporter II family protein2e-1At1g10010AAP8C.G.S.X.
0.025e+034Populus trichocarpaPtpAffx.216828.1.S1_atpmrna31864hypothetical protein-7e+0At3g53880aldo/keto reductase family proteinC.G.S.X.
0.126e-550Triticum aestivumTa.18466.1.S1_atCA605892--5e-1At5g23810AAP7C.G.S.X.
0.012e+130Vitis vinifera1620993_atCF405497--1e+1At5g09270unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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