Gene omics information

Query gene ID	Zm.496.1.S1_at
Gene name	prohibitin3
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.58	75.1	Zm.496.1.S1_at	AF236370.1	prohibitin3	-	7e-7	At5g40770	ATPHB3 (PROHIBITIN 3)	S.X.	H.G.	Please select
0.75	90.8	Zm.12836.1.S1_at	CA400077	MPPN domain containing protein	-	2e+0	At2g21220	auxin-responsive protein, putative	S.X.	H.G.	Please select
0.71	88.2	Zm.17636.1.A1_at	CK368463	-	-	1e+0	At5g34882	-	S.X.	H.G.	Please select
0.56	74.4	Zm.16536.1.A1_at	AY103592.1	spermidine synthase 1	-	1e-17	At1g23820	SPDS1 (spermidine synthase 1)	S.X.	H.G.	Please select
0.52	67.3	Zm.7152.1.A1_at	AY110483.1	hypothetical protein LOC100216962	-	7e-5	At5g47500	pectinesterase family protein	S.X.	H.G.	Please select
0.50	65.7	Zm.4024.1.A1_at	AY105692.1	-	-	1e-3	At2g35170	MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related	S.X.	H.G.	Please select
0.50	65.7	Zm.5018.3.A1_at	AI668145	-	-	9e-1	At5g48920	TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7)	S.X.	H.G.	Please select
0.44	55.7	Zm.16538.1.S1_at	BM337996	-	-	7e-15	At1g15520	PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
29.3	99.8	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
12.9	98.7	GSM162266	Wild type 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
10.2	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0	98.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM162265	Wild type 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
8.3	98.0	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM162264	Mutant 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
6.0	97.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM206330	Lower pulvinus 2 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.45	2e-150	531	Zm.495.1.A1_at	AF236369.1	prohibitin2	-	6e-1	At5g14300	ATPHB5 (PROHIBITIN 5)	C.G.	S.X.	Please select
0.01	7e-2	38	Zm.6067.2.A1_at	CA401344	hypothetical protein LOC100277938	-	9e-4	At1g22990	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	C.G.	S.X.	Please select
0.02	7e-2	38	Zm.5048.6.A1_a_at	BM380925	hypothetical protein LOC100279926 /// endoplasmin	-	3e-36	At4g24190	SHD (SHEPHERD)	C.G.	S.X.	Please select
0.02	7e-2	38	Zm.5048.6.A1_at	BM380925	endoplasmin	-	3e-36	At4g24190	SHD (SHEPHERD)	C.G.	S.X.	Please select
0.01	7e-2	38	Zm.2712.1.A1_at	AW066959	-	-	2e+0	At5g09940	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	36	Zm.2361.1.A1_at	BM381388	hypothetical protein LOC100191552	-	3e-17	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	C.G.	S.X.	Please select
0.01	3e-1	36	Zm.16276.1.A1_at	BQ164449	-	-	3e-18	At4g34660	SH3 domain-containing protein 2 (SH3P2)	C.G.	S.X.	Please select
0.01	3e-1	36	Zm.16276.1.S1_at	BQ164449	hypothetical protein LOC100273976	-	3e-18	At4g34660	SH3 domain-containing protein 2 (SH3P2)	C.G.	S.X.	Please select
0.01	3e-1	36	Zm.15802.1.A1_at	CD448422	hypothetical protein LOC100274688	-	2e-5	At1g55255	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	7e-7	56	Arabidopsis thaliana	At5g40770	834077	ATPHB3 (PROHIBITIN 3)	prohibitin 3	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.29	2e-32	141	Glycine max	Gma.15151.1.S1_at	BG238739	-	-	2e+0	At5g40770	ATPHB3 (PROHIBITIN 3)	C.G.	S.X.	Please select
0.53	1e-148	525	Hordeum vulgare	Contig1890_at	Contig1890	-	-	9e-3	At5g40770	ATPHB3 (PROHIBITIN 3)	C.G.	S.X.	Please select
0.61	0	743	Oryza sativa	Os02g0580500	AK108467.1	-	Prohibitin	4e-5	At5g40770	ATPHB3 (PROHIBITIN 3)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.08	4e-6	54	Populus trichocarpa	PtpAffx.152037.1.S1_at	AJ777662	hypothetical protein	-	2e-70	At5g40770	ATPHB3 (PROHIBITIN 3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.54	4e-153	541	Triticum aestivum	Ta.5517.1.S1_a_at	CK165863	-	-	2e-4	At5g40770	ATPHB3 (PROHIBITIN 3)	C.G.	S.X.	Please select
0.19	4e-18	91	Vitis vinifera	1609957_at	CF607251	hypothetical protein LOC100247395	-	1e-20	At5g40770	ATPHB3 (PROHIBITIN 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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