Gene omics information

Query gene ID Zm.4860.2.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.4860.2.A1_atAI770577--3e+0At2g34140Dof-type zinc finger domain-containing proteinS.X.H.G.
0.5065.7Zm.16380.1.A1_atCK985558hypothetical protein LOC100278221-5e+0At4g24644unknown proteinS.X.H.G.
0.5065.7Zm.3773.1.S1_atAY110209.1hypothetical protein LOC100193094-4e+0At4g18620-S.X.H.G.
0.4048.5Zm.13835.1.S1_atCO518326hypothetical protein LOC100193923-2e+0At1g27640unknown proteinS.X.H.G.
0.3131.6Zm.18033.1.A1_atBM080835--1e+0At1g11240unknown proteinS.X.H.G.
0.2622.7Zm.384.1.A1_atAF001635.1physical impedance induced protein2-6e+0At5g03100F-box family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
42.899.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
40.999.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
36.599.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.099.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.799.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.999.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.799.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.598.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.498.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.497.5GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000807Zm.4860.2.S1_a_atAI770577mRNA decapping enzyme 2-3e+0At2g34140Dof-type zinc finger domain-containing proteinC.G.S.X.
0.167e-95345Zm.4860.1.S1_atCD437324mRNA decapping enzyme 2-9e-1At5g13570DCP2 (DECAPPING 2)C.G.S.X.
0.023e-134Zm.6069.2.S1_atCO530423--9e-9At3g5749040S ribosomal protein S2 (RPS2D)C.G.S.X.
0.023e-134Zm.2267.1.S1_a_atAY105804.1hypothetical protein LOC100216854-7e-7At1g79860ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)C.G.S.X.
0.023e-134Zm.2267.1.A1_atAY105804.1Hypothetical protein LOC100216854-7e-7At1g79860ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)C.G.S.X.
0.033e-134Zm.2267.2.S1_atAW330896hypothetical protein LOC100216854-6e+0At4g14740phosphoinositide bindingC.G.S.X.
0.023e-134Zm.2267.1.S1_atAY105804.1--7e-7At1g79860ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)C.G.S.X.
0.021e+032Zm.5335.1.A1_atCO522689hypothetical protein LOC100191146-6e-1At5g47320RPS19 (RIBOSOMAL PROTEIN S19)C.G.S.X.
0.021e+032Zm.4853.1.S1_atCD439703--2e-1At2g45070SEC61 BETAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e+032Arabidopsis thalianaAt2g34140817975Dof-type zinc finger domain-containing proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;PO---C.G.S.X.
0.042e-240Glycine maxGma.12266.1.A1_atAI856124--1e-33At5g13570DCP2 (DECAPPING 2)C.G.S.X.
0.153e-48190Hordeum vulgareContig6016_s_atContig6016--4e-2At5g13570DCP2 (DECAPPING 2)C.G.S.X.
0.172e-52206Oryza sativaOs02g0805900AK073740.1-Dcp2, box A domain containing protein3e+0At4g27380unknown proteinC.G.S.X.
0.042e-240Populus trichocarpaPtpAffx.94735.1.A1_atCV273818--4e+0At5g19030RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.331e-42173Triticum aestivumTaAffx.79975.1.S1_atCA704878--1e+0At4g36410UBC17 (UBIQUITIN-CONJUGATING ENZYME 17)C.G.S.X.
0.049e-132Vitis vinifera1617388_atCF215211hypothetical protein LOC100260437-3e-30At3g55530SDIR1 (SALT- AND DROUGHT-INDUCED RING FINGER1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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