Gene omics information

Query gene ID	Zm.4846.1.A1_at
Gene name	cyclin B2
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.4846.1.A1_at	BQ538226	cyclin B2	-	3e-7	At1g76310	CYCB2	S.X.	H.G.	Please select
0.67	85.8	Zm.4845.1.S1_x_at	CD442886	alcohol dehydrogenase1 /// syntaxin-related protein KNOLLE	-	4e-5	At4g03330	SYP123 (SYNTAXIN OF PLANTS 123)	S.X.	H.G.	Please select
0.61	79.5	Zm.9411.1.S1_at	CA827391	SNF1-related protein kinase regulatory subunit beta-2	-	4e-1	At4g26150	CGA1 (CYTOKININ-RESPONSIVE GATA FACTOR 1)	S.X.	H.G.	Please select
0.59	76.1	Zm.5276.1.A1_at	AY108798.1	brain protein 44-like	-	2e-5	At5g20090	unknown protein	S.X.	H.G.	Please select
0.50	65.7	Zm.3780.1.S1_at	AW438304	low-molecular-weight cysteine-rich protein LCR69	-	9e-2	At1g47317	-	S.X.	H.G.	Please select
0.32	33.4	Zm.3773.1.A1_at	AY110209.1	Hypothetical protein LOC100193094	-	4e+0	At4g18620	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
25.4	99.6	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
22.8	99.5	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
19.9	99.3	GSM202302	B73xMo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
18.4	99.2	GSM202307	B73xMo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
17.8	99.1	GSM202292	B73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
16.7	99.1	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
15.2	98.9	GSM202306	Mo17xB73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
13.3	98.8	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
13.2	98.8	GSM202296	B73xMo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
13.0	98.7	GSM202295	Mo17xB73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	1e-1	38	Zm.11932.1.A1_at	BM381964	-	-	6e-1	At5g27690	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.5020.1.S1_at	AI600437	hypothetical protein LOC100216870	-	1e-5	At4g29080	PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2)	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.3420.1.A1_at	AI614990	cyclin IIZm	-	3e-4	At1g77390	CYCA1	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.2497.1.S1_at	AY107480.1	hypothetical protein LOC100272917	-	3e-55	At4g12400	stress-inducible protein, putative	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.12028.1.A1_at	AW224961	delta-aminolevulinic acid dehydratase	-	2e-26	At1g69740	HEMB1	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.8972.1.S1_at	CD435957	hypothetical protein LOC100217237	-	7e-17	At3g54320	WRI1 (WRINKLED 1)	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.6527.1.A1_at	AY105149.1	-	-	1e-1	At1g12090	ELP (EXTENSIN-LIKE PROTEIN)	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.5171.1.S1_at	AY107361.1	transposon protein	-	2e-8	At5g25510	serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.5108.1.A1_at	AI600869	xyloglucan endotransglucosylase/hydrolase protein 23	-	1e-3	At5g57550	XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	3e-7	57	Arabidopsis thaliana	At1g76310	843964	CYCB2	core cell cycle genes	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e-5	52	Glycine max	Gma.174.1.A1_at	X62303.1	mitotic cyclin	-	2e-3	At3g11520	CYCB1	C.G.	S.X.	Please select
0.01	5e-1	36	Hordeum vulgare	Contig16487_at	Contig16487	-	-	3e-1	At5g62320	ATMYB99 (MYB DOMAIN PROTEIN 99)	C.G.	S.X.	Please select
0.37	7e-102	373	Oryza sativa	Os04g0563700	AB024987.1	-	Cyclin	4e-6	At1g76310	CYCB2	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	2e-9	65	Populus trichocarpa	PtpAffx.147539.1.A1_at	CV234344	-	-	6e-13	At1g76310	CYCB2	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.10	2e-14	81	Triticum aestivum	Ta.30182.1.S1_at	BJ210537	-	-	3e-1	At3g15440	-	C.G.	S.X.	Please select
0.05	3e-4	46	Vitis vinifera	1619665_at	CF213120	hypothetical protein LOC100262390	-	6e-3	At4g35620	CYCB2	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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