Gene omics information

Query gene ID Zm.4662.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.4662.1.A1_atBG266353--1e-1At2g21060ATGRP2B (GLYCINE-RICH PROTEIN 2B)S.X.H.G.
0.3641.3Zm.117.1.S1_atAI834548iojap striping1-7e-1At3g12930-S.X.H.G.
0.115.3Zm.1067.1.A1_atBM267163V-type H+-ATPase-3e-70At1g75630AVA-P4S.X.H.G.
0.115.3Zm.18949.1.A1_atCO533095hypothetical protein LOC100280231-4e-2At4g37550formamidase, putative / formamide amidohydrolase, putativeS.X.H.G.
0.104.6Zm.4434.1.S1_atCA402082--2e+0At4g10925F-box family proteinS.X.H.G.
0.094.0Zm.5616.1.A1_atCK368985threonine endopeptidase-2e+0At4g12270copper amine oxidase family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.498.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.298.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.298.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.998.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.498.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.298.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.198.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.598.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.597.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.496.2GSM206309Lower pulvinus 30 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.058e-1063Zm.9130.1.A1_atBM268570--7e-2At3g62220serine/threonine protein kinase, putativeC.G.S.X.
0.042e-756Zm.8505.1.A1_atAY107567.1--1e-4At1g51870protein kinase family proteinC.G.S.X.
0.037e-754Zm.2220.4.A1_a_atAY110053.1Hypothetical protein LOC100216733-1e-1At5g16500protein kinase family proteinC.G.S.X.
0.037e-754Zm.2220.4.S1_atAY110053.1hypothetical protein LOC100216733-1e-1At5g16500protein kinase family proteinC.G.S.X.
0.027e-754Zm.2220.3.S1_atCA826703hypothetical protein LOC100273713-9e-4At3g55450protein kinase, putativeC.G.S.X.
0.025e-548Zm.8941.1.A1_atBM334004hypothetical protein LOC100273259-2e-1At5g02230haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.035e-548Zm.6800.1.A1_atAI691347--8e-2At3g20530protein kinase family proteinC.G.S.X.
0.035e-548Zm.15027.1.A1_atBM268637catalytic/ hydrolase-7e+0At3g62040catalytic/ hydrolaseC.G.S.X.
0.033e-342Zm.7753.1.A1_atBM337798hypothetical protein LOC100191438-3e-2At2g48010RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-138Arabidopsis thalianaAt2g21060816641ATGRP2B (GLYCINE-RICH PROTEIN 2B)glycine-rich protein (AtGRP2b)---C.G.S.X.
0.049e-342Glycine maxGmaAffx.92535.1.S1_atCF808260--6e-2At1g26970protein kinase, putativeC.G.S.X.
0.376e-60230Hordeum vulgareContig24077_atContig24077--1e+0At1g48480RKL1C.G.S.X.
0.193e-77289Oryza sativaOs08g0276400AK102100.1-Protein kinase domain containing protein3e-8At2g24230leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.084e-240Populus trichocarpaPtpAffx.214857.1.S1_atpmrna28761hypothetical protein-9e-2At3g20530protein kinase family proteinC.G.S.X.
0.472e-74280Triticum aestivumTaAffx.70444.1.A1_atCD492068--1e+0At5g02800protein kinase family proteinC.G.S.X.
0.032e+032Vitis vinifera1616189_atCF511570hypothetical protein LOC100260741-6e-18At1g75820CLV1 (CLAVATA 1)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage