Gene omics information

Query gene ID Zm.4618.1.A1_at
Gene name pre-mRNA-splicing factor ISY1
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6381.1Zm.4618.1.A1_atAW066311pre-mRNA-splicing factor ISY1-4e-7At3g18790-S.X.H.G.
0.6785.8Zm.14052.1.A1_atCF036019hypothetical protein LOC100272508-3e-17At2g22400NOL1/NOP2/sun family proteinS.X.H.G.
0.6381.1Zm.10865.1.A1_atCF638037hypothetical protein LOC100275271-1e-6At2g44090-S.X.H.G.
0.6179.5Zm.1047.1.S1_atCB381142hypothetical protein LOC100277178-1e+0At1g10865-S.X.H.G.
0.6077.8Zm.264.2.A1_x_atCF012670acetyl-coenzyme A carboxylase-8e+0At5g02890transferase family proteinS.X.H.G.
0.5775.1Zm.24.2.S1_atAJ001635.1viviparous1-3e+0At2g40765unknown proteinS.X.H.G.
0.5571.6Zm.3611.1.S1_atCA403298choline-phosphate cytidylyltransferase B-2e-22At4g15130catalytic/ choline-phosphate cytidylyltransferase/ nucleotidyltransferaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.998.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.598.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.898.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.698.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.798.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.298.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.897.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.096.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.796.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.793.2GSM205365Mo17 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.014e-238Zm.5932.1.S1_atAB071695.1response regulator 10-3e-1At2g01760ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14)C.G.S.X.
0.022e-136Zm.12742.1.A1_atCD440044prefoldin subunit 2-1e-1At1g68490unknown proteinC.G.S.X.
0.026e-134Zm.9851.1.A1_atBM380606--4e-1At4g18160KCO6C.G.S.X.
0.026e-134Zm.5799.1.A1_atAI649714gamma-tocopherol methyltransferase-8e-13At1g64970G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE)C.G.S.X.
0.026e-134Zm.549.1.A1_atAF244686.1glutathione S-transferase GST 21-2e+0At2g09840-C.G.S.X.
0.033e+032Zm.3740.1.A1_atBG84085722.0 kDa class IV heat shock protein-1e-1At4g24240WRKY7C.G.S.X.
0.013e+032Zm.370.1.S1_atAF023159.1starch synthase DULL1-1e-21At1g11720ATSS3 (starch synthase 3)C.G.S.X.
0.013e+032Zm.15915.1.S1_atAI964614--3e-7At2g45770CPFTSYC.G.S.X.
0.031e+130ZmAffx.793.1.A1_atAI770322--8e-1At1g64890integral membrane transporter family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.074e-756Arabidopsis thalianaAt3g18790821412-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFPBVA---C.G.S.X.
0.111e-138Glycine maxGmaAffx.55466.1.S1_atBM271288--1e-15At3g18790-C.G.S.X.
0.196e-2097Hordeum vulgareContig17681_atContig17681--1e-3At3g18790-C.G.S.X.
0.201e-36155Oryza sativaOs02g0602500AK064340.1-Isy1-like splicing family protein5e-8At3g18790-C.G.S.X.
0.069e-342Populus trichocarpaPtpAffx.53822.1.S1_atCV270700--3e-12At5g64813LIP1 (Light Insensitive Period1)C.G.S.X.
0.219e-27121Triticum aestivumTa.25969.1.S1_atCD454010--4e-8At3g18790-C.G.S.X.
0.032e+032Vitis vinifera1615398_atCB348091hypothetical protein LOC100254579-2e-1At1g29420-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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