Gene omics information

Query gene ID Zm.4602.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7188.2Zm.4602.1.A1_atAI737296--1e-1At3g01280VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)S.X.H.G.
0.4048.5Zm.18556.1.S1_atCO049296versicolorin reductase-3e+0At1g11230unknown proteinS.X.H.G.
0.3641.3Zm.16824.1.S1_a_atCF602732SAM domain family protein-5e-1At3g07170sterile alpha motif (SAM) domain-containing proteinS.X.H.G.
0.3538.9Zm.4332.1.S1_atAY105199.1--6e-1At4g15640unknown proteinS.X.H.G.
0.158.6Zm.12431.1.S1_atAY106853.1hypothetical protein LOC100217105-4e+0At4g18400unknown proteinS.X.H.G.
0.115.3Zm.10423.1.S1_atCN844467fatty acid desaturase8-6e-14At5g05580FAD8 (FATTY ACID DESATURASE 8)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.595.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.094.0GSM205365Mo17 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.893.5GSM385707Deep-sowing 10d treatment IAA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
2.893.5GSM253269ZM_4.5d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
2.793.2GSM253270ZM_4.5d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
2.793.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.692.9GSM375788Deep-sowing 10d treatment Control, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
2.492.2GSM375791Deep-sowing 10d treatment GA3, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
2.492.2GSM205369Mo17 13 DAP endosperm tissue biological replicate 2GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.492.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e-136Zm.2427.1.S1_atAY108148.1hypothetical protein LOC100217316-1e-3At2g43970La domain-containing proteinC.G.S.X.
0.012e-136Zm.18304.1.S1_atCO522721--6e-14At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.029e-134ZmAffx.838.1.A1_atAI770588--3e+0At1g61700DNA-directed RNA polymerase II, putative (RPB10)C.G.S.X.
0.029e-134ZmAffx.838.1.S1_atAI770588--3e+0At1g61700DNA-directed RNA polymerase II, putative (RPB10)C.G.S.X.
0.019e-134Zm.5571.1.A1_atAY111074.1hypothetical protein LOC100194279-2e-1At3g04100AGL57C.G.S.X.
0.019e-134Zm.2710.1.S1_atCO520765gibberellin receptor GID1L2-1e+1At5g06570hydrolaseC.G.S.X.
0.024e+032ZmAffx.888.1.A1_atAI770836--9e-3At5g66350SHI (SHORT INTERNODES)C.G.S.X.
0.024e+032ZmAffx.888.1.S1_atAI770836hypothetical protein LOC100277924-9e-3At5g66350SHI (SHORT INTERNODES)C.G.S.X.
0.014e+032Zm.7856.1.A1_atCA400312--6e-1At3g09700DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e-138Arabidopsis thalianaAt3g01280820914VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.---C.G.S.X.
0.033e-344Glycine maxHgAffx.13639.1.S1_atCB374343--4e+0At5g59950RNA and export factor-binding protein, putativeC.G.S.X.
0.232e-42173Hordeum vulgareHVSMEi0008D23r2_atHVSMEi0008D23r2--1e+0At1g36622unknown proteinC.G.S.X.
0.125e-1583Oryza sativaOs03g0275900AK121978.1-U box domain containing protein6e-3At3g46510PUB13 (PLANT U-BOX 13)C.G.S.X.
0.035e-240Populus trichocarpaPtp.7931.2.S1_atDN502668hypothetical protein-6e-1At5g19480unknown proteinC.G.S.X.
0.303e-33143Triticum aestivumTaAffx.9068.1.S1_x_atCA613991--4e+0At4g01000ubiquitin family proteinC.G.S.X.
0.022e-136Vitis vinifera1619309_atCF207278hypothetical protein LOC100260023-6e-39At5g44110POP1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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